RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SAC3D1A6NKF1 404 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 KIF28PB7ZC32 967 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 MYL3P08590 195 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 GRK5P34947 590 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 ADPRHP54922 357 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 POU3F1Q03052 451 aaPredicted RBP5.59□□□□□ -1.51
CCDC7-209ENST00000539197 EEF1A2Q05639 463 aaKnown RBP5.59□□□□□ -1.51
CCDC7-209ENST00000539197 COBLL1Q53SF7 1204 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 TMEM71Q6P5X7 295 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 AAGABQ6PD74 315 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 CLIP4Q8N3C7 705 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 FAM110DQ8TAY7 271 aaPredicted RBP5.59□□□□□ -1.51
CCDC7-209ENST00000539197 BICD2Q8TD16 824 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 REXO5Q96IC2 774 aaKnown RBP5.59□□□□□ -1.51
CCDC7-209ENST00000539197 NAA15Q9BXJ9 866 aaKnown RBP5.59□□□□□ -1.51
CCDC7-209ENST00000539197 DTX4Q9Y2E6 619 aa5.59□□□□□ -1.51
CCDC7-209ENST00000539197 CYP3A7-CYP3A51PA0A087WV96 503 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 TCRBV7S3A2A0A539 114 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 APAF1O14727 1248 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 CYP3A4P08684 503 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 TNFSF4P23510 183 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 CYP3A7P24462 503 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 EEF1GP26641 437 aaKnown RBP5.58□□□□□ -1.52
CCDC7-209ENST00000539197 KLRC2P26717 231 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 HILS1P60008 231 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 RHAGQ02094 409 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 TRAF3Q13114 568 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 H1FNTQ75WM6 255 aaPredicted RBP5.58□□□□□ -1.52
CCDC7-209ENST00000539197 TRABD2AQ86V40 505 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 DPP10Q8N608 796 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 IPO4Q8TEX9 1081 aaKnown RBP5.58□□□□□ -1.52
CCDC7-209ENST00000539197 ZNF566Q969W8 418 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 WBP1Q96G27 269 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 SORBS1Q9BX66 1292 aaKnown RBP5.58□□□□□ -1.52
CCDC7-209ENST00000539197 C1QTNF4Q9BXJ3 329 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 CCDC134Q9H6E4 229 aa5.58□□□□□ -1.52
CCDC7-209ENST00000539197 PLSCR5A0PG75 271 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 SRRM3A6NNA2 597 aaPredicted RBP5.57□□□□□ -1.52
CCDC7-209ENST00000539197 STMND1H3BQB6 276 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 FGF18O76093 207 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 GLP2RO95838 553 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 GRSF1Q12849 480 aaKnown RBP eCLIP5.57□□□□□ -1.52
CCDC7-209ENST00000539197 IFIT5Q13325 482 aaKnown RBP5.57□□□□□ -1.52
CCDC7-209ENST00000539197 RAB30Q15771 203 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 ZNF718Q3SXZ3 478 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 ARL6IP4Q66PJ3 421 aaKnown RBP5.57□□□□□ -1.52
CCDC7-209ENST00000539197 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 TMED6Q8WW62 240 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 RETREG1Q9H6L5 497 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 SLC52A1Q9NWF4 448 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 ARL15Q9NXU5 204 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 IGSF9Q9P2J2 1179 aa5.57□□□□□ -1.52
CCDC7-209ENST00000539197 COPG1Q9Y678 874 aaKnown RBP5.57□□□□□ -1.52
CCDC7-209ENST00000539197 PMM2O15305 246 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 SLC16A5O15375 505 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 AKT1P31749 480 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 PPP3CCP48454 512 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 PLCB4Q15147 1175 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 HLFQ16534 295 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 FBXL22Q6P050 247 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 FJX1Q86VR8 437 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 OR14A16Q8NHC5 309 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 WDR60Q8WVS4 1066 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 DUX5Q96PT3 197 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 NECTIN3Q9NQS3 549 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 NFU1Q9UMS0 254 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 ZBTB1Q9Y2K1 713 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 DOCK7Q96N67 2140 aa5.56□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3DA0A087WVF3 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3IA0A087WXS9 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3EA0A087X179 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3KA0A087X1G2 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3BA6NDS4 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3FA6NER0 549 aaPredicted RBP5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3LB9A6J9 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 PIP5K1BO14986 540 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 SOCS5O75159 536 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3HP0C7X1 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 THPOP40225 353 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 RNASELQ05823 741 aaKnown RBP5.55□□□□□ -1.52
CCDC7-209ENST00000539197 ZNF672Q499Z4 452 aaPredicted RBP5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3GQ6DHY5 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3CQ6IPX1 549 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 RINT1Q6NUQ1 792 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 SLC30A9Q6PML9 568 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 KIAA1324Q6UXG2 1013 aaKnown RBP5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TMEM200AQ86VY9 491 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 FMNL3Q8IVF7 1028 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TBC1D3Q8IZP1 549 aaPredicted RBP5.55□□□□□ -1.52
CCDC7-209ENST00000539197 TMEM255BQ8WV15 326 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 BRI3BPQ8WY22 251 aa5.55□□□□□ -1.52
CCDC7-209ENST00000539197 ACTR5Q9H9F9 607 aaPredicted RBP5.55□□□□□ -1.52
CCDC7-209ENST00000539197 LOC102724159A0A0B4J2E5 919 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 NTN3O00634 580 aaPredicted RBP5.54□□□□□ -1.52
CCDC7-209ENST00000539197 ASAP2O43150 1006 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 LDB2O43679 373 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 TCEA1P23193 301 aaKnown RBP5.54□□□□□ -1.52
CCDC7-209ENST00000539197 RBM6P78332 1123 aaKnown RBP5.54□□□□□ -1.52
CCDC7-209ENST00000539197 POU5F1BQ06416 359 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms