RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ARHGAP8P85298 464 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 IFRD2Q12894 506 aaPredicted RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 PCLAFQ15004 111 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SV2CQ496J9 727 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 DCAF6Q58WW2 860 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 C16orf46Q6P387 395 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 ULK2Q8IYT8 1036 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 TMEM199Q8N511 208 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 FBXO27Q8NI29 283 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 KCTD13Q8WZ19 329 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 ISL2Q96A47 359 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 ZNF778Q96MU6 729 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 EBF4Q9BQW3 602 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 FAM49AQ9H0Q0 323 aaPredicted RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 CDHR5Q9HBB8 845 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 TXNDC16Q9P2K2 825 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 ADAM28Q9UKQ2 775 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SOX13Q9UN79 622 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 APOBEC2Q9Y235 224 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 RAD54BQ9Y620 910 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 ITM2AO43736 263 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 FAM163BP0C2L3 166 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 SMIM10L2AP0DMW4 78 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 SMIM10L2BP0DMW5 78 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
CDCA3-207ENST00000538862 WARSP23381 471 aaKnown RBP14.87□□□□□ -0.03
CDCA3-207ENST00000538862 PSMB4P28070 264 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 AIF1P55008 147 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 IRX4P78413 519 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 TMEM62Q0P6H9 643 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 ADIGQ0VDE8 80 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 FRG1Q14331 258 aaKnown RBP14.87□□□□□ -0.03
CDCA3-207ENST00000538862 OTUD1Q5VV17 481 aaPredicted RBP14.87□□□□□ -0.03
CDCA3-207ENST00000538862 PDZD4Q76G19 769 aaPredicted RBP14.87□□□□□ -0.03
CDCA3-207ENST00000538862 MYLK4Q86YV6 388 aaPredicted RBP14.87□□□□□ -0.03
CDCA3-207ENST00000538862 ZNF567Q8N184 647 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 TOP6BLQ8N6T0 577 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 CCNYQ8ND76 341 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 PPP4R1Q8TF05 950 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 WNT8BQ93098 351 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 FAM149B1Q96BN6 582 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 CERS2Q96G23 380 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 SLC9A7Q96T83 725 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 THTPAQ9BU02 230 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 APOL6Q9BWW8 343 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 PRDM12Q9H4Q4 367 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 GPAMQ9HCL2 828 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 SYBUQ9NX95 663 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 NRCAMQ92823 1304 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 TANC1Q9C0D5 1861 aa14.87□□□□□ -0.03
CDCA3-207ENST00000538862 MAP3K7O43318 606 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 MX2P20592 715 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 KCNA4P22459 653 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 AKAP5P24588 427 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 TYK2P29597 1187 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 MAGEA12P43365 314 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 PPIGQ13427 754 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■■■■□ 25.5
CDCA3-207ENST00000538862 DPYSQ14117 519 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 CCDC153Q494R4 210 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 MDH1BQ5I0G3 518 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 RABGAP1LQ5R372 815 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 ZNF618Q5T7W0 954 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 DEFB128Q7Z7B8 93 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 RASSF3Q86WH2 238 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 B3GALNT2Q8NCR0 500 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 DTX3LQ8TDB6 740 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 PGBD4Q96DM1 585 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 SLC2A13Q96QE2 648 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 OSMRQ99650 979 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 SLC17A6Q9P2U8 582 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 COPG2Q9UBF2 871 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 SLC7A8Q9UHI5 535 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 PSAT1Q9Y617 370 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 F5H423 210 aaPredicted RBP14.86□□□□□ -0.03
CDCA3-207ENST00000538862 M0QYT0 321 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 EEF2KO00418 725 aaKnown RBP14.86□□□□□ -0.03
CDCA3-207ENST00000538862 DCLK1O15075 740 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 LYPLA1O75608 230 aaPredicted RBP14.86□□□□□ -0.03
CDCA3-207ENST00000538862 PRKCGP05129 697 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 NPR3P17342 541 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 TKTP29401 623 aaKnown RBP14.86□□□□□ -0.03
CDCA3-207ENST00000538862 CPOXP36551 454 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
CDCA3-207ENST00000538862 UBAP2LQ14157 1087 aaKnown RBP14.86□□□□□ -0.03
CDCA3-207ENST00000538862 LRIT3Q3SXY7 679 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 RIPOR1Q6ZS17 1223 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 PID1Q7Z2X4 250 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 C10orf107Q8IVU9 208 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 NME8Q8N427 588 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 VWCEQ96DN2 955 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 PANX3Q96QZ0 392 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 SORT1Q99523 831 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 LRRC40Q9H9A6 602 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 SEPT10Q9P0V9 454 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 RPS6KL1Q9Y6S9 549 aa14.86□□□□□ -0.03
CDCA3-207ENST00000538862 CDH23Q9H251 3354 aa14.85□□□□□ -0.03
CDCA3-207ENST00000538862 ZNF638Q14966 1978 aaKnown RBP14.85□□□□□ -0.03
CDCA3-207ENST00000538862 MBLAC1A4D2B0 266 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms