RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	HNRNPH3	P31942	346 aa	Known RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	L1CAM	P32004	1257 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PTGER3	P43115	390 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ZNF135	P52742	658 aa	Predicted RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	HDAC4	P56524	1084 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	RPS14	P62263	151 aa	Known RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ATP11A	P98196	1134 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	TRIM14	Q14142	442 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ACAP1	Q15027	740 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	AASDH	Q4L235	1098 aa	Predicted RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	LRSAM1	Q6UWE0	723 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	DSG4	Q86SJ6	1040 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	VPS36	Q86VN1	386 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PSTK	Q8IV42	348 aa	Known RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	TMEFF1	Q8IYR6	380 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FRMD1	Q8N878	549 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FRS2	Q8WU20	508 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PTPRN2	Q92932	1015 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FAM131C	Q96AQ9	280 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	TOE1	Q96GM8	510 aa	Known RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	NUSAP1	Q9BXS6	441 aa	Known RBP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ISCU	Q9H1K1	167 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	OR12D3	Q9UGF7	316 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SLC25A13	Q9UJS0	675 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	VPS28	Q9UK41	221 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FZD4	Q9ULV1	537 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SLC6A14	Q9UN76	642 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	NCKAP1	Q9Y2A7	1128 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SCIN	Q9Y6U3	715 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	C10orf142	B7Z368	130 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	DDX3X	O00571	662 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	TM4SF5	O14894	197 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SIN3B	O75182	1162 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CNTN5	O94779	1100 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ADH1B	P00325	375 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	RHOC	P08134	193 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	GNS	P15586	552 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	RHOQ	P17081	205 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	C5AR1	P21730	350 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	RRM1	P23921	792 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	OR1E1	P30953	314 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ATXN1	P54253	815 aa	Known RBP	12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	MAMLD1	Q13495	774 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	NUMA1	Q14980	2115 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ALF	Q53S48	1182 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	HGSNAT	Q68CP4	663 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	DCUN1D2	Q6PH85	259 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SLFN11	Q7Z7L1	901 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SLC41A1	Q8IVJ1	513 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PLPP6	Q8IY26	295 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SH2D3C	Q8N5H7	860 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FAM172A	Q8WUF8	416 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PIGK	Q92643	395 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ZDHHC5	Q9C0B5	715 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	BTBD1	Q9H0C5	482 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PABPC3	Q9H361	631 aa	Known RBP	12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	KDM4C	Q9H3R0	1056 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CAPN10	Q9HC96	672 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	MRPL47	Q9HD33	250 aa	Known RBP	12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	TMEM248	Q9NWD8	314 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SLCO3A1	Q9UIG8	710 aa		12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	LUC7L2	Q9Y383	392 aa	Known RBP	12.63	□□□□□ -0.39
CLTCL1-205	ENST00000538828	KNL1	Q8NG31	2342 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	LNP1	A1A4G5	178 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	WASH4P	A8MWX3	477 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	UPK3BL1	B0FP48	263 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	UPK3BL2	E5RIL1	263 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	MCF2L	O15068	1137 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SLC7A4	O43246	635 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FTL	P02792	175 aa	Predicted RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SERPING1	P05155	500 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PLEK	P08567	350 aa	Predicted RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ITPKA	P23677	461 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	IRAK1	P51617	712 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	GEMIN4	P57678	1058 aa	Known RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	RPL7A	P62424	266 aa	Known RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CCDC15	Q0P6D6	951 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SF3A2	Q15428	464 aa	Known RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CST6	Q15828	149 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	STPG1	Q5TH74	334 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FAM46C	Q5VWP2	391 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	E4F1	Q66K89	784 aa	Predicted RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	RETSAT	Q6NUM9	610 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	DGLUCY	Q7Z3D6	616 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	NLRP14	Q86W24	1093 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CIR1	Q86X95	450 aa	Predicted RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	OR52K2	Q8NGK3	314 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	ISG20	Q96AZ6	181 aa	Known RBP	12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	TBC1D31	Q96DN5	1066 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CCDC114	Q96M63	670 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	HSPA12B	Q96MM6	686 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	MCEE	Q96PE7	176 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	FAM129B	Q96TA1	746 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	PSMB7	Q99436	277 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CEP44	Q9C0F1	390 aa		12.62	□□□□□ -0.39
CLTCL1-205	ENST00000538828	MUC3B	Q9H195	1237 aa		12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms