RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 NR1H3Q13133 447 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 TFDP2Q14188 446 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 TRADDQ15628 312 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 NPNTQ6UXI9 565 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 TFAP2DQ7Z6R9 452 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 CARNMT1Q8N4J0 409 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 RTL3Q8N8U3 475 aaKnown RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 ACTL9Q8TC94 416 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 CATSPERBQ9H7T0 1116 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 ARHGEF4Q9NR80 690 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 TMEM248Q9NWD8 314 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 MUTYHQ9UIF7 546 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 DNPEPQ9ULA0 475 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 CCDC151A5D8V7 595 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 WASH4PA8MWX3 477 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 APOL1O14791 398 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 DCLK1O15075 740 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 CLDN11O75508 207 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 ECEL1O95672 775 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 ERCC2P18074 760 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 AMPD1P23109 780 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 MCM3P25205 808 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 TNFRSF8P28908 595 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 OPRD1P41143 372 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 SLC9A4Q6AI14 798 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 ASTLQ6HA08 431 aaPredicted RBP17.67■□□□□ 0.42
CLN6-202ENST00000538696 CXorf57Q6NSI4 855 aaKnown RBP17.67■□□□□ 0.42
CLN6-202ENST00000538696 CCNI2Q6ZMN8 369 aaPredicted RBP17.67■□□□□ 0.42
CLN6-202ENST00000538696 MFN1Q8IWA4 741 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 IFT20Q8IY31 132 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 NAT16Q8N8M0 369 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 SLC35B2Q8TB61 432 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 SLCO2A1Q92959 643 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 CCDC114Q96M63 670 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 DPH5Q9H2P9 285 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 HEBP1Q9NRV9 189 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 NDFIP2Q9NV92 336 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 ETNK2Q9NVF9 386 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 SAE1Q9UBE0 346 aaPredicted RBP17.67■□□□□ 0.42
CLN6-202ENST00000538696 MFHAS1Q9Y4C4 1052 aa17.67■□□□□ 0.42
CLN6-202ENST00000538696 APOC4-APOC2K7ER74 178 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 TRIM24O15164 1050 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 DAPK3O43293 454 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 TULP3O75386 442 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 SEC31AO94979 1220 aaKnown RBP17.66■□□□□ 0.42
CLN6-202ENST00000538696 APOC2P02655 101 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 CTHP32929 405 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 SLC6A11P48066 632 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 CARSP49589 748 aaKnown RBP17.66■□□□□ 0.42
CLN6-202ENST00000538696 CDH18Q13634 790 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 DUPD1Q68J44 220 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 DRICH1Q6PGQ1 229 aaPredicted RBP17.66■□□□□ 0.42
CLN6-202ENST00000538696 C1orf228Q6PIY5 440 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 PLD5Q8N7P1 536 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 TTC13Q8NBP0 860 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 OR52K2Q8NGK3 314 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 NKD2Q969F2 451 aaPredicted RBP17.66■□□□□ 0.42
CLN6-202ENST00000538696 LMLNQ96KR4 655 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 XPO6Q96QU8 1125 aaKnown RBP17.66■□□□□ 0.42
CLN6-202ENST00000538696 TRIM31Q9BZY9 425 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 DNAJC17Q9NVM6 304 aaKnown RBP17.66■□□□□ 0.42
CLN6-202ENST00000538696 FBXO10Q9UK96 956 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 PIAS3Q9Y6X2 628 aa17.66■□□□□ 0.42
CLN6-202ENST00000538696 SHROOM3Q8TF72 1996 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.65■□□□□ 0.42
CLN6-202ENST00000538696 SPECC1L-ADORA2AF8WAN1 911 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 H0Y626 953 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 CISD3P0C7P0 127 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 TGM2P21980 687 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 MAPKAPK2P49137 400 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 ZNF177Q13360 481 aaPredicted RBP17.65■□□□□ 0.42
CLN6-202ENST00000538696 OASLQ15646 514 aaKnown RBP17.65■□□□□ 0.42
CLN6-202ENST00000538696 FSCBQ5H9T9 825 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 NCBP2-AS2Q69YL0 99 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 TXNDC11Q6PKC3 985 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 PHTF2Q8N3S3 785 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 NPWQ8N729 165 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 FIBINQ8TAL6 211 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 IFT81Q8WYA0 676 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 SEC14L1Q92503 715 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 UHRF1Q96T88 793 aaPredicted RBP17.65■□□□□ 0.42
CLN6-202ENST00000538696 ERP44Q9BS26 406 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 FRMD8P1Q9BZ68 369 aaPredicted RBP17.65■□□□□ 0.42
CLN6-202ENST00000538696 KLC2Q9H0B6 622 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 RAB17Q9H0T7 212 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 RETREG1Q9H6L5 497 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 C8orf33Q9H7E9 229 aaPredicted RBP17.65■□□□□ 0.42
CLN6-202ENST00000538696 TBC1D30Q9Y2I9 924 aa17.65■□□□□ 0.42
CLN6-202ENST00000538696 UTP11Q9Y3A2 253 aaKnown RBP17.65■□□□□ 0.42
CLN6-202ENST00000538696 MUC22E2RYF6 1773 aaPredicted RBP17.64■□□□□ 0.41
CLN6-202ENST00000538696 SHISA7A6NL88 538 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 ERLIN1O75477 346 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 RHOCP08134 193 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 HLA-FP30511 346 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 OR1E1P30953 314 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms