RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SYPL2Q5VXT5 272 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 TMC6Q7Z403 805 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 PPM1KQ8N3J5 372 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC25A45Q8N413 288 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 ZNF248Q8NDW4 579 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 FRS2Q8WU20 508 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 KAT5Q92993 513 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 GOLPH3LQ9H4A5 285 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 CAAP1Q9H8G2 361 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 CPNE5Q9HCH3 593 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 ST7Q9NRC1 585 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 UCKL1Q9NWZ5 548 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 DMTF1Q9Y222 760 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 MYO18BQ8IUG5 2567 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 F5H5T6 163 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 PRAMEF26H0Y7S4 382 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 J3QKU1 62 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 ERVH48-1M5A8F1 160 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC7A4O43246 635 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 BNIP3LO60238 219 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 PRLRP16471 622 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 TMPRSS3P57727 454 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 GABREP78334 506 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 E2F1Q01094 437 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 CNTN1Q12860 1018 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 OVGP1Q12889 678 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 ARHGAP40Q5TG30 622 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 AGBL4Q5VU57 503 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 BROXQ5VW32 411 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 DSG4Q86SJ6 1040 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 TRIM69Q86WT6 500 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 CCAR2Q8N163 923 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 CACTIN-AS1Q8N1I8 211 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 OR8D1Q8WZ84 308 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 KLK6Q92876 244 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC35C1Q96A29 364 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 KLHDC7BQ96G42 594 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 HSFY1Q96LI6 401 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 NT5C1BQ96P26 610 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 TSG101Q99816 390 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 KDM4CQ9H3R0 1056 aa14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 ARMCX3Q9UH62 379 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-206ENST00000538456 FAM237AA0A1B0GTK4 181 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 A0A1B0GVM2 712 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC31A1O15431 190 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 THEGLP0DJG4 465 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 MYF5P13349 255 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 DGKAP23743 735 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 NUDT1P36639 197 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 PRCPP42785 496 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 PMS1P54277 932 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 STILQ15468 1287 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 FAM46CQ5VWP2 391 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 ANKRD40Q6AI12 368 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 Q6ZVU0 165 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 OR4C6Q8NH72 309 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 SNX21Q969T3 373 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 FAM131CQ96AQ9 280 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 BTN2A3PQ96KV6 586 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 FZD3Q9NPG1 666 aa14.42□□□□□ -0.1
SMARCA4-206ENST00000538456 NAV2Q8IVL1 2488 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 TRIM49BA6NDI0 452 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 C1QTNF3-AMACRE9PGA6 284 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 PYCARD-AS1I3L0S3 204 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 SART1O43290 800 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 OPA1O60313 960 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 RNGTTO60942 597 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 USP12O75317 370 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 ZNF202O95125 648 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 ZNF18P17022 549 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 FMO5P49326 533 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 PITX1P78337 314 aaPredicted RBP14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 KRT85P78386 507 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 FKBP3Q00688 224 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 CENPCQ03188 943 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 SULT2A1Q06520 285 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 KCNMA1Q12791 1236 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 PNOCQ13519 176 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC12A1Q13621 1099 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 CXorf57Q6NSI4 855 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 HIC2Q96JB3 615 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 ZNF578Q96N58 590 aaPredicted RBP14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 DEPDC7Q96QD5 511 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 CALN1Q9BXU9 219 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 OSBPL2Q9H1P3 480 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC25A13Q9UJS0 675 aa14.41□□□□□ -0.1
SMARCA4-206ENST00000538456 PIEZO2Q9H5I5 2752 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 SYNJ2BP-COX16A0A087WUM0 186 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 TCAF2A6NFQ2 919 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 CAPN8A6NHC0 703 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 CSO75390 466 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 TRUB2O95900 331 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 CKMT1AP12532 417 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 TAS2R38P59533 333 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 RHDQ02161 417 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 LY6DQ14210 128 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 RABGAP1LQ5R372 815 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 RRAGAQ7L523 313 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 ATP6V0D2Q8N8Y2 350 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms