RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TUBBP07437 444 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 UQCRHP07919 91 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TCF3P15923 654 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RBL1P28749 1068 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TNNT3P45378 269 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GNA12Q03113 381 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 USP4Q13107 963 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PRPSAP1Q14558 356 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SIX1Q15475 284 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZNF77Q15935 545 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CYP1B1Q16678 543 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PARP15Q460N3 678 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MANEALQ5VSG8 457 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TANGO2Q6ICL3 276 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DRICH1Q6PGQ1 229 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 C4orf22Q6V702 233 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PID1Q7Z2X4 250 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 JAMLQ86YT9 394 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 UMODL1-AS1Q8N2C9 162 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CPA6Q8N4T0 437 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TAB3Q8N5C8 712 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ADAMTS19Q8TE59 1207 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 USP33Q8TEY7 942 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 OSCP1Q8WVF1 389 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HTR3CQ8WXA8 447 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IRF7Q92985 503 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NKD2Q969F2 451 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MSLNLQ96KJ4 702 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MYADMQ96S97 322 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LGMNQ99538 433 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HINFPQ9BQA5 517 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KXD1Q9BQD3 176 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TRMT61BQ9BVS5 477 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DPH5Q9H2P9 285 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BRD9Q9H8M2 597 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 EPB41L5Q9HCM4 733 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PCYOX1Q9UHG3 505 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 STOML2Q9UJZ1 356 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 VPS28Q9UK41 221 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TRANK1O15050 2925 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HELZP42694 1942 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ILVBLA1L0T0 632 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BCLAF3A2AJT9 711 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GOLGA6CA6NDK9 693 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GOLGA6BA6NDN3 693 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CBX4O00257 560 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NRG2O14511 850 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GOLGA6DP0CG33 693 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ADH5P11766 374 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TYRP14679 529 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PSMC3P17980 439 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CCNCP24863 283 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GDI1P31150 447 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HOXC13P31276 330 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LTBRP36941 435 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GARSP41250 739 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RENBPP51606 427 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZXDBP98169 803 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GALNT2Q10471 571 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC10A2Q12908 348 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GPS1Q13098 491 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SMAD4Q13485 552 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GRM2Q14416 872 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LY6G5CQ5SRR4 150 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MPP7Q5T2T1 576 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ITPRIPL1Q6GPH6 555 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TTC27Q6P3X3 843 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NUDT18Q6ZVK8 323 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PCGF5Q86SE9 256 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TMEM25Q86YD3 366 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MFSD6LQ8IWD5 586 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ALLCQ8N6M5 410 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GPR161Q8N6U8 529 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NAT16Q8N8M0 369 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SMRP1Q8NCR6 262 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LRRN4CLQ8ND94 238 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC35B2Q8TB61 432 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DEPDC1BQ8WUY9 529 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 EXOC4Q96A65 974 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ELSPBP1Q96BH3 223 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 QKIQ96PU8 341 aaKnown RBP eCLIP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TRIM51Q9BSJ1 452 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FAM114A2Q9NRY5 505 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GOLGA6AQ9NYA3 693 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PAK5Q9P286 719 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IPO11Q9UI26 975 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ANAPC5Q9UJX4 755 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC8A2Q9UPR5 921 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DENND4AQ7Z401 1863 aa10.91□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RNF103O00237 685 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MBTPS2O43462 519 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ERLIN1O75477 346 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PAPLNO95428 1278 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 JCHAINP01591 159 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NNMTP40261 264 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NUMBP49757 651 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IRAK1P51617 712 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SGSHP51688 502 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms