RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 OR6P1Q8NGX9 317 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 SHKBP1Q8TBC3 707 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 ARNTL2Q8WYA1 636 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 BHMTQ93088 406 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 FAXDC2Q96IV6 333 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 FTHL17Q9BXU8 183 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 FRMD8Q9BZ67 464 aaPredicted RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 WWP1Q9H0M0 922 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 LRRC40Q9H9A6 602 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 RBM22Q9NW64 420 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 CCNB1P14635 433 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 CPA3P15088 417 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 CTGFP29279 349 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 CCND3P30281 292 aaPredicted RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 MPP1Q00013 466 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 MPP3Q13368 585 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 SLC41A1Q8IVJ1 513 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 RNF148Q8N7C7 305 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 TRIB2Q92519 343 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 LRRC39Q96DD0 335 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 FCRL2Q96LA5 508 aaPredicted RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 NDNQ99608 321 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 WDR6Q9NNW5 1121 aaKnown RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 CHST12Q9NRB3 414 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 FBXW11Q9UKB1 542 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 TK2O00142 265 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 GPR182O15218 404 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 GSC2O15499 205 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 DCXO43602 365 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 PAGE1O75459 146 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 CIB2O75838 187 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 TSPAN8P19075 237 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 SPRP35270 261 aaPredicted RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 SERPINB5P36952 375 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 GP5P40197 560 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 PRKCZQ05513 592 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 CNGA3Q16281 694 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 ANKRD20A4Q4UJ75 823 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 RPS27LQ71UM5 84 aaKnown RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF280BQ86YH2 543 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 THEM5Q8N1Q8 247 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 RBM15BQ8NDT2 890 aaKnown RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 RTP4Q96DX8 246 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 SEPT5Q99719 369 aaPredicted RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 WDR55Q9H6Y2 383 aaPredicted RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 NT5MQ9NPB1 228 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 SLC2A6Q9UGQ3 507 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 RUVBL2Q9Y230 463 aaKnown RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 HBS1LQ9Y450 684 aaKnown RBP8.89□□□□□ -0.99
UBE3B-208ENST00000538070 HACD1B0YJ81 288 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 CA8P35219 290 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 SLC12A2P55011 1212 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 YWHAHQ04917 246 aaPredicted RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 CUL3Q13618 768 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 PDCD2Q16342 344 aaPredicted RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 SNX31Q8N9S9 440 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 KCTD4Q8WVF5 259 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 CASP10Q92851 521 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 MTBPQ96DY7 904 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 OLFM3Q96PB7 478 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 MLPHQ9BV36 600 aaPredicted RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 TRPV6Q9H1D0 765 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 DMAP1Q9NPF5 467 aaPredicted RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 CNGB3Q9NQW8 809 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 GTF2IRD1Q9UHL9 959 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 USP3Q9Y6I4 520 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 SHROOM3Q8TF72 1996 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 A0A1W2PQH9 124 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 PLIN3O60664 434 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 GLRA3O75311 464 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 USP1O94782 785 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 SORBS2O94875 1100 aaKnown RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 C2P06681 752 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 MX2P20592 715 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 CD68P34810 354 aaPredicted RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 CRHR1P34998 444 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 SERPINB6P35237 376 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 SLC5A3P53794 718 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 TEX44Q53QW1 395 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 RALGPS1Q5JS13 557 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 ESRP1Q6NXG1 681 aaKnown RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 TTC9BQ8N6N2 239 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 ELMO2Q96JJ3 720 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 C11orf84Q9BUA3 381 aaPredicted RBP8.88□□□□□ -0.99
UBE3B-208ENST00000538070 NACA2Q9H009 215 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 RNPEPL1Q9HAU8 725 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 HCSTQ9UBK5 93 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 CDH9Q9ULB4 789 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 WASF2Q9Y6W5 498 aa8.88□□□□□ -0.99
UBE3B-208ENST00000538070 AIM2O14862 343 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 DCLK1O15075 740 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PEX11AO75192 247 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 TADA2AO75478 443 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 FBXO21O94952 628 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CHRNGP07510 517 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PRKAR2AP13861 404 aaKnown RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PTDSS1P48651 473 aaKnown RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 NAGLUP54802 743 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 ADAM17P78536 824 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 DPYSQ14117 519 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms