RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 SIX6OS1Q8N1H7 587 aa11.59□□□□□ -0.55
SEMA4D-221ENST00000537934 CPSF7Q8N684 471 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-221ENST00000537934 GTF3C2Q8WUA4 911 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-221ENST00000537934 ZFYVE28Q9HCC9 887 aa11.59□□□□□ -0.55
SEMA4D-221ENST00000537934 PNPOQ9NVS9 261 aa11.59□□□□□ -0.55
SEMA4D-221ENST00000537934 POU2F3Q9UKI9 436 aa11.59□□□□□ -0.55
SEMA4D-221ENST00000537934 PLXNB2O15031 1838 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 NOTOA8MTQ0 251 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 PLOD2O00469 737 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 AIM2O14862 343 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ZBTB14O43829 449 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 KLHL41O60662 606 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 GSRP00390 522 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 APOEP02649 317 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ENDOUP21128 410 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ME2P23368 584 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ICAM3P32942 547 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 GNA12Q03113 381 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 NFATC3Q12968 1075 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 PMS2P3Q13401 168 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 LRRC38Q5VT99 294 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 PPP2R2DQ66LE6 453 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 RGMBQ6NW40 437 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ZNF677Q86XU0 584 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 C12orf56Q8IXR9 622 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 FAM47BQ8NA70 645 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 PDPRQ8NCN5 879 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 TNIP2Q8NFZ5 429 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 DHX38Q92620 1227 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 NT5C1BQ96P26 610 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ANKMY1Q9P2S6 941 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 MORF4L1Q9UBU8 362 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 CPA4Q9UI42 421 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ACOT8O14734 319 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 TLR3O15455 904 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 HTRA2O43464 458 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 GCATO75600 419 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 KRT75O95678 551 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 CHEK2O96017 543 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 KRT5P13647 590 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 GABRB2P47870 512 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 GPC3P51654 580 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 EIF3EP60228 445 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 ATP6V0D1P61421 351 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 OTUD4Q01804 1114 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 CEACAM7Q14002 265 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 RAB39AQ14964 217 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 GALNT18Q6P9A2 607 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 TMEM26Q6ZUK4 368 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 C11orf74Q86VG3 221 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 C4orf19Q8IY42 314 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 DAW1Q8N136 415 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 CNDP2Q96KP4 475 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 LENG8Q96PV6 779 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 FRMD8P1Q9BZ68 369 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 IMPG2Q9BZV3 1241 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 QPCTLQ9NXS2 382 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 IP6K2Q9UHH9 426 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 IPO11Q9UI26 975 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 IVNS1ABPQ9Y6Y0 642 aa11.58□□□□□ -0.56
SEMA4D-221ENST00000537934 DOCK3Q8IZD9 2030 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 C1orf232A0A0U1RR37 186 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 CXorf49A8MYA2 514 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 GPR25O00155 361 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 TRDMT1O14717 391 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 FARP2O94887 1054 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 CALCAP01258 141 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 S100BP04271 92 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 MSX2P35548 267 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 CDKN2BP42772 138 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 GRSF1Q12849 480 aaKnown RBP eCLIP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 TRAF2Q12933 501 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 GRM1Q13255 1194 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 NHSL2Q5HYW2 709 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 VWA5B1Q5TIE3 1220 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 ABHD15Q6UXT9 468 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 ADGRF2Q8IZF7 708 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 XXYLT1Q8NBI6 393 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 OR7G1Q8NGA0 311 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 LILRB4Q8NHJ6 448 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 RSAD2Q8WXG1 361 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 SORT1Q99523 831 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 PDGFCQ9NRA1 345 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 COQ4Q9Y3A0 265 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 HTTP42858 3142 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 RGSL1A5PLK6 1076 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 NOL3O60936 208 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 MYO1DO94832 1006 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 LYPLA2O95372 231 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 PARNO95453 639 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 SERPINE1P05121 402 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 ZNF182P17025 639 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 PRKCHP24723 683 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 MCCD1P59942 119 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 CBLBQ13191 982 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 SELENBP1Q13228 472 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 BMPR2Q13873 1038 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 DGKDQ16760 1214 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 FAM47CQ5HY64 1035 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 ZNF618Q5T7W0 954 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms