RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 PGFP49763 221 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 GEMP55040 296 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 DNAJC3Q13217 504 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 PLD1Q13393 1074 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 RAB33AQ14088 237 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 SPARCL1Q14515 664 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 SHHQ15465 462 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 KBTBD12Q3ZCT8 623 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 SPANXN3Q5MJ09 141 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 SYCP2LQ5T4T6 812 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 RASIP1Q5U651 963 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 CASC4Q6P4E1 433 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 UNC5AQ6ZN44 842 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
TMEM258-204ENST00000537328 ARHGAP12Q8IWW6 846 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 CTAGE3PQ8IX95 158 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 KLHDC8BQ8IXV7 354 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 TTC9BQ8N6N2 239 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 GIPC2Q8TF65 315 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 TRMT2BQ96GJ1 504 aaKnown RBP16.63■□□□□ 0.25
TMEM258-204ENST00000537328 FCRL5Q96RD9 977 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 IL12RB2Q99665 862 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 DDX50Q9BQ39 737 aaKnown RBP16.63■□□□□ 0.25
TMEM258-204ENST00000537328 HCSTQ9UBK5 93 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 NUDT5Q9UKK9 219 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 NEU3Q9UQ49 428 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 TTLL3Q9Y4R7 772 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 PCDHB12Q9Y5F1 795 aa16.63■□□□□ 0.25
TMEM258-204ENST00000537328 FAM159BA6NKW6 160 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 TM9SF1O15321 606 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 CACNG3O60359 315 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 ALDH1A2O94788 518 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 SLC11A2P49281 568 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 RENBPP51606 427 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 YBEYP58557 167 aaPredicted RBP16.62■□□□□ 0.25
TMEM258-204ENST00000537328 MS4A13Q5J8X5 152 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 C9orf50Q5SZB4 431 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 HECTD3Q5T447 861 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 PIK3R6Q5UE93 754 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 GKAP1Q5VSY0 366 aaPredicted RBP16.62■□□□□ 0.25
TMEM258-204ENST00000537328 TAX1BP1Q86VP1 789 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 ANKRD42Q8N9B4 389 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 CKAP2Q8WWK9 683 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 PLD4Q96BZ4 506 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 CELF6Q96J87 481 aaKnown RBP16.62■□□□□ 0.25
TMEM258-204ENST00000537328 MYRFLQ96LU7 910 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 MAGEB18Q96M61 343 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 ZNF512Q96ME7 567 aaPredicted RBP16.62■□□□□ 0.25
TMEM258-204ENST00000537328 FAM161BQ96MY7 647 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 AGAP3Q96P47 875 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 PRMT1Q99873 361 aaKnown RBP16.62■□□□□ 0.25
TMEM258-204ENST00000537328 CLSTN3Q9BQT9 956 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 SLC39A8Q9C0K1 460 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 NACA2Q9H009 215 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 CASS4Q9NQ75 786 aa16.62■□□□□ 0.25
TMEM258-204ENST00000537328 MAGED2Q9UNF1 606 aaPredicted RBP16.62■□□□□ 0.25
TMEM258-204ENST00000537328 FNDC1Q4ZHG4 1894 aaPredicted RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 MAFKO60675 156 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 SOAT2O75908 522 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 ATF6P18850 670 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 NFKB1P19838 968 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 CCT5P48643 541 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 HARS2P49590 506 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 SEC24CP53992 1094 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 HNRNPH2P55795 449 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 SESN2P58004 480 aaPredicted RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 WDR5P61964 334 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 CDH17Q12864 832 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 HNRNPDQ14103 355 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 PARP15Q460N3 678 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 HHATQ5VTY9 493 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 KCTD11Q693B1 232 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 FAM109BQ6ICB4 259 aaPredicted RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 ITIH5Q86UX2 942 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 MIB1Q86YT6 1006 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 CCDC117Q8IWD4 279 aaPredicted RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 PPM1NQ8N819 430 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 DNAAF3Q8N9W5 541 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 GPR152Q8TDT2 470 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 DEPDC1BQ8WUY9 529 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 MRRFQ96E11 262 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 IL22Q9GZX6 179 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 CRISPLD1Q9H336 500 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 RC3H2Q9HBD1 1191 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 GLOD4Q9HC38 313 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 IL23AQ9NPF7 189 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 MRPL17Q9NRX2 175 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 MOCS1Q9NZB8 636 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 IPO11Q9UI26 975 aaKnown RBP16.61■□□□□ 0.25
TMEM258-204ENST00000537328 VANGL2Q9ULK5 521 aa16.61■□□□□ 0.25
TMEM258-204ENST00000537328 F5H5T6 163 aa16.6■□□□□ 0.25
TMEM258-204ENST00000537328 VIMP08670 466 aaKnown RBP16.6■□□□□ 0.25
TMEM258-204ENST00000537328 CA4P22748 312 aa16.6■□□□□ 0.25
TMEM258-204ENST00000537328 MGAT1P26572 445 aa16.6■□□□□ 0.25
TMEM258-204ENST00000537328 PAPOLAP51003 745 aaKnown RBP16.6■□□□□ 0.25
TMEM258-204ENST00000537328 EPHB3P54753 998 aa16.6■□□□□ 0.25
TMEM258-204ENST00000537328 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
TMEM258-204ENST00000537328 ZBTB17Q13105 803 aa16.6■□□□□ 0.25
TMEM258-204ENST00000537328 PABPC1LQ4VXU2 614 aaKnown RBP16.6■□□□□ 0.25
TMEM258-204ENST00000537328 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms