RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 HACE1Q8IYU2 909 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 ARHGAP24Q8N264 748 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 CELF6Q96J87 481 aaKnown RBP13.16□□□□□ -0.3
TRIM25-202ENST00000537230 ZNF778Q96MU6 729 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 TMLHEQ9NVH6 421 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 TTC36A6NLP5 189 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 SNNO75324 88 aaPredicted RBP13.16□□□□□ -0.3
TRIM25-202ENST00000537230 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
TRIM25-202ENST00000537230 IL1BP01584 269 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 ITGA2BP08514 1039 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 ARRB2P32121 409 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 PGFP49763 221 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 PGGT1BP53609 377 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 C17orf99Q6UX52 265 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 ULK2Q8IYT8 1036 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 C7orf26Q96N11 449 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 TKTL2Q9H0I9 626 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 ZCWPW1Q9H0M4 648 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
TRIM25-202ENST00000537230 KCNK4Q9NYG8 393 aa13.16□□□□□ -0.3
TRIM25-202ENST00000537230 CCDC78A2IDD5 438 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 MAGEC1O60732 1142 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 ITGB1P05556 798 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 BDNFP23560 247 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 SERPINB9P50453 376 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 ZNF157P51786 506 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 CERCAMQ5T4B2 595 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 TAF2Q6P1X5 1199 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 TIFABQ6ZNK6 161 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 CYS1Q717R9 158 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 MFSD3Q96ES6 412 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 TSPAN18Q96SJ8 248 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 MLPHQ9BV36 600 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 CPSF2Q9P2I0 782 aaKnown RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 IGSF9Q9P2J2 1179 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 OR12D3Q9UGF7 316 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 PPM1HQ9ULR3 514 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 MEI4A8MW99 385 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 PRR5-ARHGAP8B1AHC4 643 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 LRIG2O94898 1065 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 LYNP07948 512 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 TPH1P17752 444 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 ARHGAP8P85298 464 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 UBAP2LQ14157 1087 aaKnown RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 UPP1Q16831 310 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 C1orf146Q5VVC0 180 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 ZNF419Q96HQ0 510 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 TRIM4Q9C037 500 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 SENP6Q9GZR1 1112 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 CNGB3Q9NQW8 809 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 ANGPTL2Q9UKU9 493 aa13.15□□□□□ -0.3
TRIM25-202ENST00000537230 HBS1LQ9Y450 684 aaKnown RBP13.15□□□□□ -0.3
TRIM25-202ENST00000537230 SF3B1O75533 1304 aaKnown RBP eCLIP13.15□□□□□ -0.31
TRIM25-202ENST00000537230 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TM7SF2O76062 418 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 CD52P31358 61 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 RGS2P41220 211 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 LHX1P48742 406 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 SCAPQ12770 1279 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 DLG2Q15700 870 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 FAM91A1Q658Y4 838 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 ARHGAP36Q6ZRI8 547 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 RASAL3Q86YV0 1011 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 ACVR1CQ8NER5 493 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 CERS2Q96G23 380 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 RILPQ96NA2 401 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TUBGCP5Q96RT8 1024 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 APBA2Q99767 749 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TRPV2Q9Y5S1 764 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
TRIM25-202ENST00000537230 F8W8V4 182 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 SPECC1L-ADORA2AF8WAN1 911 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 B3GAT3O94766 335 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 FGF3P11487 239 aaPredicted RBP13.14□□□□□ -0.31
TRIM25-202ENST00000537230 NFKB1P19838 968 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 ACTR3P61158 418 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 PDE1BQ01064 536 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TRIM32Q13049 653 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 ATG16L1Q676U5 607 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 MBLAC2Q68D91 279 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 PLD6Q8N2A8 252 aaKnown RBP13.14□□□□□ -0.31
TRIM25-202ENST00000537230 ZNF669Q96BR6 464 aaPredicted RBP13.14□□□□□ -0.31
TRIM25-202ENST00000537230 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 SLC9A7Q96T83 725 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 WDCPQ9H6R7 721 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms