RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 AUHQ13825 339 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CAMK4Q16566 473 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CCDC157Q569K6 752 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PRAMEF14Q5SWL7 426 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3GQ6DHY5 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SMYD5Q6GMV2 418 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3CQ6IPX1 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CXorf57Q6NSI4 855 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 FAM183BPQ6ZVS7 135 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DSG4Q86SJ6 1040 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3Q8IZP1 549 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MDM1Q8TC05 714 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 FRS2Q8WU20 508 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SERAC1Q96JX3 654 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SLC25A13Q9UJS0 675 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 BPTFQ12830 3046 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 KRT9P35527 623 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 VASPP50552 380 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ZNF177Q13360 481 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 COL9A2Q14055 689 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ACCSLQ4AC99 568 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SLC45A4Q5BKX6 768 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 OLFML1Q6UWY5 402 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 GATAD2AQ86YP4 633 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 C1orf131Q8NDD1 294 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 OR8D1Q8WZ84 308 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 FEM1AQ9BSK4 669 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SYNCQ9H7C4 482 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 GDF3Q9NR23 364 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 VANGL2Q9ULK5 521 aa20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SMG1Q96Q15 3661 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1B-204ENST00000536782 A0A1W2PR77 199 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 WNT9AO14904 365 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 YKT6O15498 198 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DAB1O75553 588 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ERBB2P04626 1255 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ITGAVP06756 1048 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DRD3P35462 400 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MTIF2P46199 727 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SLC6A3Q01959 620 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 FAM46CQ5VWP2 391 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SLC26A9Q7LBE3 791 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 IRF2BP1Q8IU81 584 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ALG14Q96F25 216 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 KDM4CQ9H3R0 1056 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 VPS28Q9UK41 221 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DNAJC12Q9UKB3 198 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 GPSM3Q9Y4H4 160 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 HS3ST4Q9Y661 456 aa20.24■□□□□ 0.83
TNFRSF1B-204ENST00000536782 M0QYT0 321 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SLC7A4O43246 635 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 LATO43561 262 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ATP9BO43861 1147 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 RTN2O75298 545 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PAGE1O75459 146 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CLDN11O75508 207 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 NOS2P35228 1153 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ARRB1P49407 418 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 IRAK1P51617 712 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 METAP1P53582 386 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PPP2CBP62714 309 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PPP2CAP67775 309 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SHBQ15464 509 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SMAD1Q15797 465 aaKnown RBP20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TPD52L1Q16890 204 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 NAPEPLDQ6IQ20 393 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PRPF39Q86UA1 669 aaKnown RBP20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MARCH9Q86YJ5 346 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 OR52K2Q8NGK3 314 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SAP25Q8TEE9 199 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 FAM131CQ96AQ9 280 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SIX2Q9NPC8 291 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DKK4Q9UBT3 224 aa20.23■□□□□ 0.83
TNFRSF1B-204ENST00000536782 C1QTNF3-AMACRE9PGA6 284 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TLR4O00206 839 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 FOXN3O00409 490 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PLK4O00444 970 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ALOX15BO15296 676 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PLRG1O43660 514 aaKnown RBP20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 LDOC1O95751 146 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ZNF18P17022 549 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CLCN1P35523 988 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CDH4P55283 916 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 NXPH1P58417 271 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 UBE2HP62256 183 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DLG2Q15700 870 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PTPN20Q4JDL3 420 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 C19orf48Q6RUI8 117 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 DHRS13Q6UX07 377 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SLC47A2Q86VL8 602 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ZDHHC17Q8IUH5 632 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 MLKLQ8NB16 471 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 ZNF397Q8NF99 534 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SIK2Q9H0K1 926 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 RRN3Q9NYV6 651 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 AJAP1Q9UKB5 411 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 SARDHQ9UL12 918 aa20.22■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PPM1HQ9ULR3 514 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms