RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 LRRC43Q8N309 656 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 CARNMT1Q8N4J0 409 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 TMEM199Q8N511 208 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 ATPAF2Q8N5M1 289 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 EFHBQ8N7U6 833 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 C12orf76Q8N812 135 aaPredicted RBP8.42□□□□□ -1.06
ABCA4-207ENST00000536513 NAT16Q8N8M0 369 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 COLGALT1Q8NBJ5 622 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 BCL7CQ8WUZ0 217 aaPredicted RBP8.42□□□□□ -1.06
ABCA4-207ENST00000536513 DDX50Q9BQ39 737 aaKnown RBP8.42□□□□□ -1.06
ABCA4-207ENST00000536513 FSD1LQ9BXM9 530 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 MUC3BQ9H195 1237 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 NT5MQ9NPB1 228 aa8.42□□□□□ -1.06
ABCA4-207ENST00000536513 A0A0U1RQS6 177 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ARHGEF37A1IGU5 675 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ZNF623O75123 536 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 FAM155BO75949 473 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 MT-CYBP00156 380 aaPredicted RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 OR1E1P30953 314 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 CCR1P32246 355 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ARL4CP56559 192 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 RPS24P62847 133 aaKnown RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 DNAJC3Q13217 504 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 RCN1Q15293 331 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 MAPRE1Q15691 268 aaKnown RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 GRAMD1BQ3KR37 738 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 MROH9Q5TGP6 573 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 UBR7Q8N806 425 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ARL14EPQ8N8R7 260 aaPredicted RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 MYLIPQ8WY64 445 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ARNTL2Q8WYA1 636 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 CCT6BQ92526 530 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 SUSD3Q96L08 255 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 RTP3Q9BQQ7 232 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 TMEM59LQ9UK28 342 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 DSEQ9UL01 958 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 NENFQ9UMX5 172 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 PCDHB12Q9Y5F1 795 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 TRIOO75962 3097 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 MGRN1O60291 552 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 GJB5O95377 273 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 EOMESO95936 686 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 FGBP02675 491 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 LRG1P02750 347 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 INHBAP08476 426 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 GABRR2P28476 465 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 PDE1BQ01064 536 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 SLC10A2Q12908 348 aaPredicted RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 NOMO1Q15155 1222 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 CLUL1Q15846 466 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 PLEKHG6Q3KR16 790 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ISLR2Q6UXK2 745 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 TMC5Q6UXY8 1006 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 TTC13Q8NBP0 860 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 OR6P1Q8NGX9 317 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 DDI1Q8WTU0 396 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 TM6SF2Q9BZW4 377 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 IRF2BPLQ9H1B7 796 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ANLNQ9NQW6 1124 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ARHGEF4Q9NR80 690 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 MRPL17Q9NRX2 175 aaKnown RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 NDFIP2Q9NV92 336 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ZC3H7BQ9UGR2 993 aaKnown RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 CNTN6Q9UQ52 1028 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 KLHL33A6NCF5 533 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 TRIM43BA6NCK2 446 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 APOC4-APOC2K7ER74 178 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 CNTN5O94779 1100 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 AGTP01019 485 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 APOC2P02655 101 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 PTGIRP43119 386 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 SCNN1BP51168 640 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 ITIH4Q14624 930 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 SDCCAG8Q86SQ7 713 aaPredicted RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 C14orf80Q86SX3 495 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 REM2Q8IYK8 340 aaPredicted RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 FIBCD1Q8N539 461 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 EXT2Q93063 718 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 TRIM43Q96BQ3 446 aaPredicted RBP8.41□□□□□ -1.06
ABCA4-207ENST00000536513 CDH22Q9UJ99 828 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 LOXHD1Q8IVV2 1947 aa8.41□□□□□ -1.06
ABCA4-207ENST00000536513 NCOR1O75376 2440 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 A0A1W2PRU2 124 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 WDR27A2RRH5 827 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 LCHNA4D1U4 455 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 RFXAPO00287 272 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 METTL18O95568 372 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 ETS2P15036 469 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 HDCP19113 662 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 ITIH2P19823 946 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 L1CAMP32004 1257 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 GMPRP36959 345 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 CPA2P48052 419 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 ITIH3Q06033 890 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 PLEKHG4Q58EX7 1191 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 MYLK4Q86YV6 388 aaPredicted RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 FAM81AQ8TBF8 368 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 NMD3Q96D46 503 aaKnown RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 RMDN1Q96DB5 314 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms