RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 DESP17661 470 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 NDUFV2P19404 249 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 CYLC1P35663 651 aaPredicted RBP18.34■□□□□ 0.53
DDX55-204ENST00000536079 NBL1P41271 181 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 COPAP53621 1224 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 GNA12Q03113 381 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 TCEAL1Q15170 157 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 C6orf118Q5T5N4 469 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 SDE2Q6IQ49 451 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 RTL3Q8N8U3 475 aaKnown RBP18.34■□□□□ 0.53
DDX55-204ENST00000536079 RFFLQ8WZ73 363 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 MKRN2Q9H000 416 aaKnown RBP18.34■□□□□ 0.53
DDX55-204ENST00000536079 KLC2Q9H0B6 622 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 POLMQ9NP87 494 aaPredicted RBP18.34■□□□□ 0.53
DDX55-204ENST00000536079 PRSS16Q9NQE7 514 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 CWC15Q9P013 229 aaKnown RBP18.34■□□□□ 0.53
DDX55-204ENST00000536079 VPS51Q9UID3 782 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 VPS28Q9UK41 221 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 DUSP10Q9Y6W6 482 aa18.34■□□□□ 0.53
DDX55-204ENST00000536079 DOCK4Q8N1I0 1966 aa18.33■□□□□ 0.53
DDX55-204ENST00000536079 GOLGA6L3A6NEY3 463 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 WASH4PA8MWX3 477 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 EEF2KO00418 725 aaKnown RBP18.33■□□□□ 0.52
DDX55-204ENST00000536079 NPC1O15118 1278 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 ASLP04424 464 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 CD48P09326 243 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 GJC1P36383 396 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 SSR1P43307 286 aaKnown RBP18.33■□□□□ 0.52
DDX55-204ENST00000536079 ARSEP51690 589 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 OXCT1P55809 520 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 TPI1P60174 286 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 SPA17Q15506 151 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 PPP6R3Q5H9R7 873 aaPredicted RBP18.33■□□□□ 0.52
DDX55-204ENST00000536079 LINGO4Q6UY18 593 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 RFX8Q6ZV50 586 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 RLN3Q8WXF3 142 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 ARHGEF2Q92974 986 aaKnown RBP18.33■□□□□ 0.52
DDX55-204ENST00000536079 MRGPRX1Q96LB2 322 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 EPAS1Q99814 870 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 DESI2Q9BSY9 194 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 SPON2Q9BUD6 331 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 FAM126AQ9BYI3 521 aaPredicted RBP18.33■□□□□ 0.52
DDX55-204ENST00000536079 LACRTQ9GZZ8 138 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 GOLPH3Q9H4A6 298 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.33■□□□□ 0.52
DDX55-204ENST00000536079 KLHL11Q9NVR0 708 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 PCDHGA2Q9Y5H1 932 aa18.33■□□□□ 0.52
DDX55-204ENST00000536079 CD160O95971 181 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 SRPRAP08240 638 aaKnown RBP18.32■□□□□ 0.52
DDX55-204ENST00000536079 IL4RP24394 825 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 MAPKAPK2P49137 400 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 NRLP54845 237 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 ARF5P84085 180 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 MMRN1Q13201 1228 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 CAMK2GQ13555 558 aaPredicted RBP18.32■□□□□ 0.52
DDX55-204ENST00000536079 DPYSQ14117 519 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 DPYSL2Q16555 572 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 BOLA3Q53S33 107 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 C9orf64Q5T6V5 341 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 PSTKQ8IV42 348 aaKnown RBP18.32■□□□□ 0.52
DDX55-204ENST00000536079 TP53INP2Q8IXH6 220 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 FRS2Q8WU20 508 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 TSC1Q92574 1164 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 ACE2Q9BYF1 805 aaPredicted RBP18.32■□□□□ 0.52
DDX55-204ENST00000536079 PCDH18Q9HCL0 1135 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 ETNK2Q9NVF9 386 aa18.32■□□□□ 0.52
DDX55-204ENST00000536079 SMAD6O43541 496 aaKnown RBP18.31■□□□□ 0.52
DDX55-204ENST00000536079 SYNCRIPO60506 623 aaKnown RBP18.31■□□□□ 0.52
DDX55-204ENST00000536079 SIN3BO75182 1162 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 ERCC2P18074 760 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 MAN1A1P33908 653 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 HNRNPA1L2Q32P51 320 aaKnown RBP18.31■□□□□ 0.52
DDX55-204ENST00000536079 ZNF783Q6ZMS7 281 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 POLNQ7Z5Q5 900 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 CACUL1Q86Y37 369 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 RHOT2Q8IXI1 618 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 PGBD3Q8N328 593 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 FAM160A2Q8N612 972 aaPredicted RBP18.31■□□□□ 0.52
DDX55-204ENST00000536079 NPWQ8N729 165 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 DCAF4L2Q8NA75 395 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 TEKT4Q8WW24 435 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 PTPRN2Q92932 1015 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 HMCESQ96FZ2 354 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 CELF6Q96J87 481 aaKnown RBP18.31■□□□□ 0.52
DDX55-204ENST00000536079 NCAPGQ9BPX3 1015 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 IRF2BPLQ9H1B7 796 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 ATP13A1Q9HD20 1204 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 BCCIPQ9P287 314 aaKnown RBP eCLIP18.31■□□□□ 0.52
DDX55-204ENST00000536079 TRIM10Q9UDY6 481 aa18.31■□□□□ 0.52
DDX55-204ENST00000536079 CCDC163A0A0D9SF12 145 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 CBX4O00257 560 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 BUB1BO60566 1050 aaPredicted RBP18.3■□□□□ 0.52
DDX55-204ENST00000536079 ALDH1A2O94788 518 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 SRCP12931 536 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 BCKDHBP21953 392 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 AMPD1P23109 780 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 ARHGAP25P42331 645 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 ST8SIA6P61647 398 aa18.3■□□□□ 0.52
DDX55-204ENST00000536079 SULT2A1Q06520 285 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms