RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ZNF367Q7RTV3 350 aa5□□□□□ -1.61
VBP1-203ENST00000535916 TMEM217Q8N7C4 229 aa5□□□□□ -1.61
VBP1-203ENST00000535916 BRI3BPQ8WY22 251 aa5□□□□□ -1.61
VBP1-203ENST00000535916 CCDC134Q9H6E4 229 aa5□□□□□ -1.61
VBP1-203ENST00000535916 DTX4Q9Y2E6 619 aa5□□□□□ -1.61
VBP1-203ENST00000535916 ZBTB1Q9Y2K1 713 aa5□□□□□ -1.61
VBP1-203ENST00000535916 COPG1Q9Y678 874 aaKnown RBP5□□□□□ -1.61
VBP1-203ENST00000535916 KIF28PB7ZC32 967 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 STMND1H3BQB6 276 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 PMM2O15305 246 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 KLRC2P26717 231 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 HNF4GQ14541 408 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 SPSB3Q6PJ21 355 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 IGFN1Q86VF2 1251 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 FAM185AQ8N0U4 392 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 IPO4Q8TEX9 1081 aaKnown RBP4.99□□□□□ -1.61
VBP1-203ENST00000535916 SORBS1Q9BX66 1292 aaKnown RBP4.99□□□□□ -1.61
VBP1-203ENST00000535916 NAA15Q9BXJ9 866 aaKnown RBP4.99□□□□□ -1.61
VBP1-203ENST00000535916 KCNG2Q9UJ96 466 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 ERRFI1Q9UJM3 462 aaPredicted RBP4.99□□□□□ -1.61
VBP1-203ENST00000535916 SLC4A4Q9Y6R1 1079 aa4.99□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3DA0A087WVF3 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3IA0A087WXS9 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3EA0A087X179 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3KA0A087X1G2 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3BA6NDS4 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3FA6NER0 549 aaPredicted RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3LB9A6J9 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 MS4A18H0YCH9 400 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 APAF1O14727 1248 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 MYL3P08590 195 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3HP0C7X1 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 ITGB8P26012 769 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 AKT1P31749 480 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 SEC61A1P61619 476 aaKnown RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 EEF1A2Q05639 463 aaKnown RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 TDRD12Q587J7 1177 aaKnown RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3GQ6DHY5 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3CQ6IPX1 549 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 RINT1Q6NUQ1 792 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 C8orf82Q6P1X6 216 aaPredicted RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 TMEM71Q6P5X7 295 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 FMNL3Q8IVF7 1028 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TBC1D3Q8IZP1 549 aaPredicted RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 CLIP4Q8N3C7 705 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 DPP10Q8N608 796 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 FAM110DQ8TAY7 271 aaPredicted RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 WDR60Q8WVS4 1066 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 C18orf8Q96DM3 657 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 MECRQ9BV79 373 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 ACTR5Q9H9F9 607 aaPredicted RBP4.98□□□□□ -1.61
VBP1-203ENST00000535916 ARL15Q9NXU5 204 aa4.98□□□□□ -1.61
VBP1-203ENST00000535916 TCRBV7S3A2A0A539 114 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 SRRM3A6NNA2 597 aaPredicted RBP4.97□□□□□ -1.61
VBP1-203ENST00000535916 VWA5AO00534 786 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 ZNF12P17014 697 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 ALDH18A1P54886 795 aaKnown RBP4.97□□□□□ -1.61
VBP1-203ENST00000535916 RBM6P78332 1123 aaKnown RBP4.97□□□□□ -1.61
VBP1-203ENST00000535916 RNASELQ05823 741 aaKnown RBP4.97□□□□□ -1.61
VBP1-203ENST00000535916 SAFBQ15424 915 aaKnown RBP eCLIP4.97□□□□□ -1.61
VBP1-203ENST00000535916 MPEG1Q2M385 716 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 SLC30A9Q6PML9 568 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 TMEM200AQ86VY9 491 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 FOXP4Q8IVH2 680 aaPredicted RBP4.97□□□□□ -1.61
VBP1-203ENST00000535916 BICD2Q8TD16 824 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 TMED6Q8WW62 240 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 SARGQ9BW04 601 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 C1QTNF4Q9BXJ3 329 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 TMEM120AQ9BXJ8 343 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 KLHL31Q9H511 634 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 TM7SF3Q9NS93 570 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 PKP3Q9Y446 797 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 CEP83Q9Y592 693 aa4.97□□□□□ -1.61
VBP1-203ENST00000535916 PLSCR5A0PG75 271 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 DENND3A2RUS2 1198 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 HNRNPDLO14979 420 aaKnown RBP4.96□□□□□ -1.62
VBP1-203ENST00000535916 PIP5K1BO14986 540 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 NPPBP16860 134 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 PPP3CCP48454 512 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 HSPA7P48741 367 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 PLCB4Q15147 1175 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 ZNF284Q2VY69 593 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 ZNF718Q3SXZ3 478 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 ANKS1BQ7Z6G8 1248 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 DPP9Q86TI2 863 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 FJX1Q86VR8 437 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 RTP4Q96DX8 246 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 RIPOR3Q96MK2 946 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 IGSF9Q9P2J2 1179 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 RAP2CQ9Y3L5 183 aa4.96□□□□□ -1.62
VBP1-203ENST00000535916 SAC3D1A6NKF1 404 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 SLC38A8A6NNN8 435 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 RASA4BC9J798 803 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 RASA4O43374 803 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 LDB2O43679 373 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 AVPR1AP37288 418 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 SF3A3Q12874 501 aaKnown RBP eCLIP4.95□□□□□ -1.62
VBP1-203ENST00000535916 TRAF3Q13114 568 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 KRTAP24-1Q3LI83 254 aa4.95□□□□□ -1.62
VBP1-203ENST00000535916 ZNF569Q5MCW4 686 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms