RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 TP53BP1Q12888 1972 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 MAST4O15021 2626 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 F5H5T6 163 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 KCNK3O14649 394 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 WNT9AO14904 365 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 HSF2BPO75031 334 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 CLDN11O75508 207 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 DXOO77932 396 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 LDOC1O95751 146 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 SCNN1AP37088 669 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 CLCN6P51797 869 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 LRMPQ12912 555 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 PDCLQ13371 301 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 EFHC1Q5JVL4 640 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 RABGAP1LQ5R372 815 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 ARTNQ5T4W7 220 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 C6orf118Q5T5N4 469 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 AGBL4Q5VU57 503 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 IGF2-ASQ6U949 168 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 DHRS13Q6UX07 377 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 MMS22LQ6ZRQ5 1243 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 SLC26A9Q7LBE3 791 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 SPATS2Q86XZ4 545 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 ZDHHC17Q8IUH5 632 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 ARHGEF19Q8IW93 802 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 STK40Q8N2I9 435 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 CARNMT1Q8N4J0 409 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 WDTC1Q8N5D0 677 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 TMIEQ8NEW7 156 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 SHC3Q92529 594 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 SERAC1Q96JX3 654 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 C1orf74Q96LT6 269 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 UBL7Q96S82 380 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 SRRTQ9BXP5 876 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 PRORYQ9H606 182 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 RETREG1Q9H6L5 497 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 USP29Q9HBJ7 922 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 TJP2Q9UDY2 1190 aa11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 NYNRINQ9P2P1 1898 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-206ENST00000535668 IGLV3-10A0A075B6K4 115 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 E5RJQ4 531 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 PRAMEF26H0Y7S4 382 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 AFPP02771 609 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 ITGAVP06756 1048 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 GP1BAP07359 652 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 ABCB4P21439 1286 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 CDK17Q00537 523 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 E2F1Q01094 437 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 CCDC15Q0P6D6 951 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 FBXL22Q6P050 247 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 C19orf48Q6RUI8 117 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 LAYNQ6UX15 382 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 RRAGAQ7L523 313 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 ARCQ7LC44 396 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 BNIPLQ7Z465 357 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 SETD3Q86TU7 594 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 PRPF39Q86UA1 669 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 PLPP6Q8IY26 295 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 ZNF683Q8IZ20 524 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 LGI2Q8N0V4 545 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 CFAP52Q8N1V2 620 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 SH2D3CQ8N5H7 860 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 FAM181AQ8N9Y4 354 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 OR14C36Q8NHC7 312 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 SNRNP27Q8WVK2 155 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 FAM149B1Q96BN6 582 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 WBP1Q96G27 269 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 CNDP2Q96KP4 475 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 MIS12Q9H081 205 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 STIM2Q9P246 746 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 AHCTF1Q8WYP5 2266 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 ATMQ13315 3056 aa11.54□□□□□ -0.56
CLSTN3-206ENST00000535668 DRGXA6NNA5 263 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 BECN2A8MW95 431 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 CAPN9O14815 690 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 GIMD1P0DJR0 217 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 JUPP14923 745 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 CDH5P33151 784 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 CDH4P55283 916 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 SNX16P57768 344 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 TAS2R38P59533 333 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 PPP2CBP62714 309 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 PPP2CAP67775 309 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 NUCB2P80303 420 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 AUHQ13825 339 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 CCDC40Q4G0X9 1142 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 SETMARQ53H47 684 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 PIP5KL1Q5T9C9 394 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 CDCP2Q5VXM1 449 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 RAP1GAP2Q684P5 730 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 TRIM65Q6PJ69 517 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 OLFML1Q6UWY5 402 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 ZNF783Q6ZMS7 281 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 ABI3BPQ7Z7G0 1075 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms