RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 NRG1Q02297 640 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-227ENST00000533909 SCAPQ12770 1279 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 LYSMD4Q5XG99 296 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 PMS2CLQ68D20 193 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 ZNF783Q6ZMS7 281 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 DSG4Q86SJ6 1040 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 METTL3Q86U44 580 aaKnown RBP13.73□□□□□ -0.21
CAPN1-227ENST00000533909 TMEFF1Q8IYR6 380 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 ZNF683Q8IZ20 524 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 C12orf50Q8NA57 414 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-227ENST00000533909 ATP11CQ8NB49 1132 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 FNIP1Q8TF40 1166 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 CTNNBL1Q8WYA6 563 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-227ENST00000533909 MRGPRX3Q96LB0 322 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 CCDC114Q96M63 670 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 CCDC42Q96M95 316 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 NUP85Q9BW27 656 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 THAP2Q9H0W7 228 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 RETREG1Q9H6L5 497 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 CD248Q9HCU0 757 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 ATP13A1Q9HD20 1204 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 HPCAL4Q9UM19 191 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 NCKAP1Q9Y2A7 1128 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FAM72CH0Y354 149 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 DAPK3O43293 454 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 BNIP3LO60238 219 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 LRIG2O94898 1065 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 L1CAMP32004 1257 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 MPLP40238 635 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 SSR1P43307 286 aaKnown RBP13.72□□□□□ -0.21
CAPN1-227ENST00000533909 MAPKAPK2P49137 400 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 TPMTP51580 245 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 COPAP53621 1224 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 TPI1P60174 286 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 OGDHQ02218 1023 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 GNA12Q03113 381 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 LMNB2Q03252 620 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 ZBTB16Q05516 673 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 GFPT1Q06210 699 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-227ENST00000533909 SPDYCQ5MJ68 293 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FAM72AQ5TYM5 149 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FAM72DQ6L9T8 149 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 RETSATQ6NUM9 610 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FAM124AQ86V42 546 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FAM72BQ86X60 149 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 DEFB119Q8N690 84 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 DCAF4L2Q8NA75 395 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 TOE1Q96GM8 510 aaKnown RBP13.72□□□□□ -0.21
CAPN1-227ENST00000533909 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 MTG2Q9H4K7 406 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 DHX35Q9H5Z1 703 aaKnown RBP13.72□□□□□ -0.21
CAPN1-227ENST00000533909 CATSPERBQ9H7T0 1116 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 VPS45Q9NRW7 570 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 SEMA4GQ9NTN9 838 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 DONSONQ9NYP3 566 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 CTTNBP2NLQ9P2B4 639 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 MBD1Q9UIS9 605 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-227ENST00000533909 ANAPC7Q9UJX3 599 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FZD10Q9ULW2 581 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 AP4E1Q9UPM8 1137 aa13.72□□□□□ -0.21
CAPN1-227ENST00000533909 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-227ENST00000533909 CEP250Q9BV73 2442 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 EML5Q05BV3 1969 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 A0A0D9SEW6 157 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 MEI4A8MW99 385 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 EIF3CLB5ME19 914 aaKnown RBP13.71□□□□□ -0.21
CAPN1-227ENST00000533909 RAMP2O60895 175 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 IL1BP01584 269 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 DPP6P42658 865 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 RECQLP46063 649 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-227ENST00000533909 PSMD8P48556 350 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 RPS14P62263 151 aaKnown RBP13.71□□□□□ -0.21
CAPN1-227ENST00000533909 PIGHQ14442 188 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-227ENST00000533909 ELAVL3Q14576 367 aaKnown RBP13.71□□□□□ -0.21
CAPN1-227ENST00000533909 ARID5BQ14865 1188 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 CCDC6Q16204 474 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 CSRP2Q16527 193 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 SLC18A3Q16572 532 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 SYCP2LQ5T4T6 812 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 RGL4Q8IZJ4 473 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 ABCA7Q8IZY2 2146 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 PYROXD2Q8N2H3 581 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 OR52K2Q8NGK3 314 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 OR8D1Q8WZ84 308 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 PIGKQ92643 395 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 FOXJ1Q92949 421 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 ALG14Q96F25 216 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 EIF3CQ99613 913 aaKnown RBP13.71□□□□□ -0.21
CAPN1-227ENST00000533909 OMDQ99983 421 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 TRIM7Q9C029 511 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 RSPH9Q9H1X1 276 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms