RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CEACAM1P13688 526 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 NSFP46459 744 aaKnown RBP10.73□□□□□ -0.69
CAPN1-225ENST00000533704 CSNK1EP49674 416 aaKnown RBP10.73□□□□□ -0.69
CAPN1-225ENST00000533704 CDH4P55283 916 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 NCAPHQ15003 741 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 POM121L1PQ3SYA9 428 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 ALFQ53S48 1182 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 CAVIN1Q6NZI2 390 aaKnown RBP10.73□□□□□ -0.69
CAPN1-225ENST00000533704 NCEH1Q6PIU2 408 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 LAYNQ6UX15 382 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 TRIM72Q6ZMU5 477 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 RXFP2Q8WXD0 754 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 PTPRN2Q92932 1015 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 BIRC7Q96CA5 298 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 FAM129BQ96TA1 746 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 FEM1AQ9BSK4 669 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 NAT10Q9H0A0 1025 aaKnown RBP10.73□□□□□ -0.69
CAPN1-225ENST00000533704 PCED1AQ9H1Q7 454 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 NEUROG2Q9H2A3 272 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 TMEM59LQ9UK28 342 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 SCML1Q9UN30 329 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 DAAM1Q9Y4D1 1078 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 SLCO1B1Q9Y6L6 691 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 EPG5Q9HCE0 2579 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 TDRD6O60522 2096 aaKnown RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 LRRC72A6NJI9 287 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 E9PAM4 449 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 SNAP91O60641 907 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 CER1O95813 267 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 ADH1BP00325 375 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 SPINK2P20155 84 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 MMP8P22894 467 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 PMLP29590 882 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 SDC4P31431 198 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 AFF3P51826 1226 aaKnown RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 PLK1P53350 603 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 GALCP54803 685 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 KRT83P78385 493 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 SIM1P81133 766 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 SEMA3BQ13214 749 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 ELAVL3Q14576 367 aaKnown RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 ARID5BQ14865 1188 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 TEAD4Q15561 434 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 DLG2Q15700 870 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 C15orf59Q2T9L4 293 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 RAB6CQ53S08 254 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 KIAA0895LQ68EN5 471 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 Q6ZVU0 165 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 USP30Q70CQ3 517 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 ADAT2Q7Z6V5 191 aaKnown RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 OR14C36Q8NHC7 312 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 JOSD2Q8TAC2 188 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 SETD7Q8WTS6 366 aaKnown RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 OR8D1Q8WZ84 308 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 NT5C3BQ969T7 300 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 ALG14Q96F25 216 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 PGAP3Q96FM1 320 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 CAMK1GQ96NX5 476 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 PCDHB18PQ96TA0 734 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 SPON2Q9BUD6 331 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 ZDHHC5Q9C0B5 715 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 RAB6CQ9H0N0 254 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 GAREM1Q9H706 876 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 IL21RQ9HBE5 538 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 TM9SF3Q9HD45 589 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 DNAAF2Q9NVR5 837 aaKnown RBP10.72□□□□□ -0.69
CAPN1-225ENST00000533704 ADAM22Q9P0K1 906 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
CAPN1-225ENST00000533704 KCNK3O14649 394 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 TEX33O43247 280 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 SH3BP5O60239 455 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 MT-CO1P00395 513 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 CD59P13987 128 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 GOT1P17174 413 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 C5AR1P21730 350 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 CD27P26842 260 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 OR1E1P30953 314 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 METAP1P53582 386 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 BNC1Q01954 994 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 CLEC16AQ2KHT3 1053 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 KIF19Q2TAC6 998 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 HLA-BQ31612 363 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 C5orf22Q49AR2 442 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 LINGO4Q6UY18 593 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 DSG4Q86SJ6 1040 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 PIP4P1Q86T03 277 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 DRC7Q8IY82 874 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 SH2D3CQ8N5H7 860 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 AADATQ8N5Z0 425 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 ATP11CQ8NB49 1132 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 OR7D4Q8NG98 312 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 C1orf216Q8TAB5 229 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 CHD5Q8TDI0 1954 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 FRS2Q8WU20 508 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 ERGIC2Q96RQ1 377 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 AGPAT1Q99943 283 aa10.71□□□□□ -0.69
CAPN1-225ENST00000533704 C2orf49Q9BVC5 232 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-225ENST00000533704 SELENOOQ9BVL4 669 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms