RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 AHI1Q8N157 1196 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 CRYBG2Q8N1P7 616 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 DRAXINQ8NBI3 349 aaPredicted RBP16.96■□□□□ 0.31
CTSB-228ENST00000533455 ADCY4Q8NFM4 1077 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 EZH1Q92800 747 aaPredicted RBP16.96■□□□□ 0.31
CTSB-228ENST00000533455 DGCR14Q96DF8 476 aaKnown RBP16.96■□□□□ 0.31
CTSB-228ENST00000533455 AGAP3Q96P47 875 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 DRC3Q9H069 523 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 ZCWPW1Q9H0M4 648 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 CASS4Q9NQ75 786 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 OTOFQ9HC10 1997 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 COL1A2P08123 1366 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 AIM2O14862 343 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 C2P06681 752 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 MPSTP25325 297 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 ADORA2BP29275 332 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 PMLP29590 882 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 THOP1P52888 689 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 DPYSQ14117 519 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 ZBTB6Q15916 424 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 DALRD3Q5D0E6 543 aaKnown RBP16.96■□□□□ 0.3
CTSB-228ENST00000533455 ARMC3Q5W041 872 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 ZYG11AQ6WRX3 759 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 DEFB106AQ8N104 65 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 MRPS26Q9BYN8 205 aaKnown RBP16.96■□□□□ 0.3
CTSB-228ENST00000533455 UBE2OQ9C0C9 1292 aaKnown RBP16.96■□□□□ 0.3
CTSB-228ENST00000533455 IL22Q9GZX6 179 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 ZNF696Q9H7X3 374 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 UBAP1Q9NZ09 502 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 BFARQ9NZS9 450 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 ATXN10Q9UBB4 475 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 VANGL2Q9ULK5 521 aa16.96■□□□□ 0.3
CTSB-228ENST00000533455 SBF1O95248 1867 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 SRCAPQ6ZRS2 3230 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
CTSB-228ENST00000533455 OR6B1O95007 311 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 ZBTB7AO95365 584 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 CRTAMO95727 393 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 LTFP02788 710 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 VGLL4Q14135 290 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 FLOT2Q14254 428 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 USP41Q3LFD5 358 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 LSM12Q3MHD2 195 aaKnown RBP16.95■□□□□ 0.3
CTSB-228ENST00000533455 PABPC1LQ4VXU2 614 aaKnown RBP16.95■□□□□ 0.3
CTSB-228ENST00000533455 SEL1L3Q68CR1 1132 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 PID1Q7Z2X4 250 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 PGAM4Q8N0Y7 254 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 CCNYQ8ND76 341 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 B4GALNT2Q8NHY0 566 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 DLG3Q92796 817 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 ATXN7L3BQ96GX2 97 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 ZFRQ96KR1 1074 aaKnown RBP16.95■□□□□ 0.3
CTSB-228ENST00000533455 SNX27Q96L92 541 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 LRGUKQ96M69 825 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 ZMAT2Q96NC0 199 aaKnown RBP16.95■□□□□ 0.3
CTSB-228ENST00000533455 AGAP2Q99490 1192 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 CXCL16Q9H2A7 254 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 ANKRD6Q9Y2G4 727 aa16.95■□□□□ 0.3
CTSB-228ENST00000533455 FZD9O00144 591 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 IRF6O14896 467 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 DCLK1O15075 740 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 PGM3O95394 542 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 LGALS2P05162 132 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 TFAP2AP05549 437 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 PTPN3P26045 913 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 PPARGP37231 505 aaPredicted RBP16.94■□□□□ 0.3
CTSB-228ENST00000533455 HADHAP40939 763 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 RPL14P50914 215 aaKnown RBP16.94■□□□□ 0.3
CTSB-228ENST00000533455 CREB5Q02930 508 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 CYLC2Q14093 348 aaPredicted RBP16.94■□□□□ 0.3
CTSB-228ENST00000533455 TTLL4Q14679 1199 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 DLG2Q15700 870 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 CNGA3Q16281 694 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 PPM1LQ5SGD2 360 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 LIPMQ5VYY2 423 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 NETO2Q8NC67 525 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 NT5C3BQ969T7 300 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 CAB39LQ9H9S4 337 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 VTI1BQ9UEU0 232 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 TUBGCP4Q9UGJ1 667 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 TMCO1Q9UM00 188 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 RAD54BQ9Y620 910 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 AP4B1Q9Y6B7 739 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 FNDC1Q4ZHG4 1894 aaPredicted RBP16.94■□□□□ 0.3
CTSB-228ENST00000533455 ZNF236Q9UL36 1845 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 PRSS51A0A1B0GVH4 220 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 ERI2A8K979 691 aaKnown RBP16.94■□□□□ 0.3
CTSB-228ENST00000533455 VILLO15195 856 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 GRID2O43424 1007 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 HCRTO43612 131 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 CREB3O43889 395 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 CLPTM1O96005 669 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 CHRNGP07510 517 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 SPATA31D3P0C874 917 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 CD1EP15812 388 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 XRCC1P18887 633 aaPredicted RBP16.94■□□□□ 0.3
CTSB-228ENST00000533455 HSPA13P48723 471 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 ARHGAP1Q07960 439 aa16.94■□□□□ 0.3
CTSB-228ENST00000533455 NSUN2Q08J23 767 aaKnown RBP eCLIP16.94■□□□□ 0.3
CTSB-228ENST00000533455 PRKAA1Q13131 559 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms