RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZNF135P52742 658 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 NRLP54845 237 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 GNA12Q03113 381 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 SULT2A1Q06520 285 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 ATP13A4Q4VNC1 1196 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 HEATR6Q6AI08 1181 aaKnown RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 WDR5BQ86VZ2 330 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 ZNF366Q8N895 744 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 DCAF4L2Q8NA75 395 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 KDM1BQ8NB78 822 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 ZBTB44Q8NCP5 570 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 RPL10LQ96L21 214 aaKnown RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 DESI2Q9BSY9 194 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 LACRTQ9GZZ8 138 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 IRF2BPLQ9H1B7 796 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 NOL6Q9H6R4 1146 aaKnown RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 CATSPERBQ9H7T0 1116 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 PCDH18Q9HCL0 1135 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 POLMQ9NP87 494 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 ZSCAN32Q9NX65 697 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 CWC15Q9P013 229 aaKnown RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 VPS51Q9UID3 782 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 SLCO3A1Q9UIG8 710 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 MUC22E2RYF6 1773 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 CCDC163A0A0D9SF12 145 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 BTNL10A8MVZ5 291 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 TTC34A8MYJ7 566 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 PJA2O43164 708 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 BUB1BO60566 1050 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 LILRB5O75023 590 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ZMPSTE24O75844 475 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ALDH1A2O94788 518 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ERCC2P18074 760 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 GABRG2P18507 467 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 GLDCP23378 1020 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 GJC1P36383 396 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ACVRL1P37023 503 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ST8SIA6P61647 398 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 KRT83P78385 493 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 CAMK2GQ13555 558 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 DPYSQ14117 519 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 STARD3Q14849 445 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ANO7Q6IWH7 933 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 POLNQ7Z5Q5 900 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 LONP2Q86WA8 852 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 LRRC8AQ8IWT6 810 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 UMODL1-AS1Q8N2C9 162 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 MDGA1Q8NFP4 955 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 FAM71BQ8TC56 605 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 TSC1Q92574 1164 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ARHGEF2Q92974 986 aaKnown RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 CSPG4P5Q96PW8 444 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 C2orf49Q9BVC5 232 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ACE2Q9BYF1 805 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-214ENST00000533209 KLC2Q9H0B6 622 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 MAGEH1Q9H213 219 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 ATP13A1Q9HD20 1204 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 PRSS16Q9NQE7 514 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 FAM86C1Q9NVL1 165 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 PCDHGA2Q9Y5H1 932 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 DUSP10Q9Y6W6 482 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 R4GN57 208 aa12.28□□□□□ -0.44
SSBP3-214ENST00000533209 DOCK4Q8N1I0 1966 aa12.27□□□□□ -0.44
SSBP3-214ENST00000533209 A0A0U1RQJ8 604 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 RASA4BC9J798 803 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 H3BRJ5 948 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 AXIN1O15169 862 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 ARHGAP6O43182 974 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 DAPK3O43293 454 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 RASA4O43374 803 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 ATP9BO43861 1147 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 SYNCRIPO60506 623 aaKnown RBP12.27□□□□□ -0.45
SSBP3-214ENST00000533209 RAMP2O60895 175 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 MT-CO1P00395 513 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 KRT7P08729 469 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 CD48P09326 243 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 NDUFV2P19404 249 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 COMTP21964 271 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 IL4RP24394 825 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 ETFBP38117 255 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 ARL4AP40617 200 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 NBL1P41271 181 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 SLC1A1P43005 524 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 COPAP53621 1224 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 CDH6P55285 790 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 YBEYP58557 167 aaPredicted RBP12.27□□□□□ -0.45
SSBP3-214ENST00000533209 NHLH1Q02575 133 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 POLD3Q15054 466 aaPredicted RBP12.27□□□□□ -0.45
SSBP3-214ENST00000533209 HNRNPA1L2Q32P51 320 aaKnown RBP12.27□□□□□ -0.45
SSBP3-214ENST00000533209 KIAA1328Q86T90 577 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 CCDC112Q8NEF3 446 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 TPCN2Q8NHX9 752 aa12.27□□□□□ -0.45
SSBP3-214ENST00000533209 FRS2Q8WU20 508 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms