RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 ABCG4Q9H172 646 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-216ENST00000533078 SLCO3A1Q9UIG8 710 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 NEMP2A6NFY4 417 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 WNT9AO14904 365 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 PLRG1O43660 514 aaKnown RBP11.91□□□□□ -0.5
CMTM1-216ENST00000533078 SIGLEC6O43699 453 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 THEGLP0DJG4 465 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 SLC2A3P11169 496 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 PDGFRAP16234 1089 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 AKT2P31751 481 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 STK19P49842 368 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-216ENST00000533078 NDUFA8P51970 172 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 MCCD1P59942 119 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-216ENST00000533078 GABREP78334 506 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 PKDCCQ504Y2 493 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 RAP1GAP2Q684P5 730 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 KRBA2Q6ZNG9 492 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 ERICH1Q86X53 443 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
CMTM1-216ENST00000533078 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 KCNE4Q8WWG9 221 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 WBP1Q96G27 269 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 USP29Q9HBJ7 922 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 PREBQ9HCU5 417 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 DYRK4Q9NR20 520 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 THSD1Q9NS62 852 aa11.91□□□□□ -0.5
CMTM1-216ENST00000533078 NYNRINQ9P2P1 1898 aaKnown RBP11.91□□□□□ -0.5
CMTM1-216ENST00000533078 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-216ENST00000533078 A0A1B0GVM2 712 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 ALOX15BO15296 676 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 RTN2O75298 545 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 TACR2P21452 398 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
CMTM1-216ENST00000533078 DRD3P35462 400 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 ERVPABLB-1P60509 514 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 MTA1Q13330 715 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 STIM1Q13586 685 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 BEND5Q7L4P6 421 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 TMC6Q7Z403 805 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 OR4C6Q8NH72 309 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 ERCC4Q92889 916 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-216ENST00000533078 SNX21Q969T3 373 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 SLC39A13Q96H72 371 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 MED15Q96RN5 788 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 DUSP23Q9BVJ7 150 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.5
CMTM1-216ENST00000533078 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 POPDC2Q9HBU9 364 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 METTL14Q9HCE5 456 aaKnown RBP11.9□□□□□ -0.5
CMTM1-216ENST00000533078 KLHL11Q9NVR0 708 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.9□□□□□ -0.5
CMTM1-216ENST00000533078 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
CMTM1-216ENST00000533078 TENM4Q6N022 2769 aa11.9□□□□□ -0.51
CMTM1-216ENST00000533078 TRIM38O00635 465 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 FFAR2O15552 330 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 MED7O43513 233 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 BNIP3LO60238 219 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 USP12O75317 370 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 MPOP05164 745 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 GP1BAP07359 652 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 CKMT1AP12532 417 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 DGKAP23743 735 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 KCNMA1Q12791 1236 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 CNTN1Q12860 1018 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 POM121L1PQ3SYA9 428 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
CMTM1-216ENST00000533078 ARHGAP40Q5TG30 622 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 KANSL1Q7Z3B3 1105 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 TAC4Q86UU9 113 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 SMYD4Q8IYR2 804 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-216ENST00000533078 CCAR2Q8N163 923 aaKnown RBP11.89□□□□□ -0.51
CMTM1-216ENST00000533078 FAM174AQ8TBP5 190 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 TFAP2BQ92481 460 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 CCDC97Q96F63 343 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-216ENST00000533078 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-216ENST00000533078 CALN1Q9BXU9 219 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 POLR1BQ9H9Y6 1135 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 NCKIPSDQ9NZQ3 722 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 COL6A6A6NMZ7 2263 aa11.89□□□□□ -0.51
CMTM1-216ENST00000533078 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-216ENST00000533078 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
CMTM1-216ENST00000533078 KCNU1A8MYU2 1149 aa11.88□□□□□ -0.51
CMTM1-216ENST00000533078 C10orf142B7Z368 130 aa11.88□□□□□ -0.51
CMTM1-216ENST00000533078 H3BM21 787 aa11.88□□□□□ -0.51
CMTM1-216ENST00000533078 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
CMTM1-216ENST00000533078 MCF2LO15068 1137 aa11.88□□□□□ -0.51
CMTM1-216ENST00000533078 SLC31A1O15431 190 aa11.88□□□□□ -0.51
CMTM1-216ENST00000533078 KLK10O43240 276 aa11.88□□□□□ -0.51
CMTM1-216ENST00000533078 OPA1O60313 960 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms