RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 LUC7L2Q9Y383 392 aaKnown RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 BZW2Q9Y6E2 419 aaKnown RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 EDDM13A0A1B0GTR0 161 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 TARSL2A2RTX5 802 aaKnown RBP15.78■□□□□ 0.12
CPSF1-210ENST00000532935 SERPING1P05155 500 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 PLEKP08567 350 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-210ENST00000532935 OXTRP30559 389 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 OR1E1P30953 314 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 ID4P47928 161 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 VASPP50552 380 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-210ENST00000532935 OGDHQ02218 1023 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 ZBTB16Q05516 673 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF33AQ06730 810 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 AASDHQ4L235 1098 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-210ENST00000532935 C6orf118Q5T5N4 469 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 MANEALQ5VSG8 457 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF776Q68DI1 518 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-210ENST00000532935 SLC41A1Q8IVJ1 513 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 RSPH9Q9H1X1 276 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF212Q9UDV6 495 aa15.78■□□□□ 0.12
CPSF1-210ENST00000532935 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.78■□□□□ 0.12
CPSF1-210ENST00000532935 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-210ENST00000532935 FAM72CH0Y354 149 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 GDF9O60383 454 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 DNTTP04053 509 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 DESP17661 470 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 ITPKAP23677 461 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 CASP14P31944 242 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 DPP6P42658 865 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 SCAPQ12770 1279 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 FAM72AQ5TYM5 149 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 TCEAL6Q6IPX3 200 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 FAM72DQ6L9T8 149 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 SCYL2Q6P3W7 929 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF783Q6ZMS7 281 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 TMC6Q7Z403 805 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 SLFN11Q7Z7L1 901 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 VPS36Q86VN1 386 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 FAM72BQ86X60 149 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 SYT12Q8IV01 421 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 PTPRN2Q92932 1015 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 TCEAL3Q969E4 200 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF653Q96CK0 615 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 TRIM11Q96F44 468 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF419Q96HQ0 510 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-210ENST00000532935 HSPA12BQ96MM6 686 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 PSMB7Q99436 277 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.77■□□□□ 0.12
CPSF1-210ENST00000532935 C2orf49Q9BVC5 232 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-210ENST00000532935 GPR174Q9BXC1 333 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 MAGEB5Q9BZ81 275 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 ISCUQ9H1K1 167 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 TMEM74BQ9NUR3 256 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 CNOT8Q9UFF9 292 aaKnown RBP15.77■□□□□ 0.12
CPSF1-210ENST00000532935 ADAMTS1Q9UHI8 967 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 PILRBQ9UKJ0 227 aa15.77■□□□□ 0.12
CPSF1-210ENST00000532935 CDV3Q9UKY7 258 aaKnown RBP15.77■□□□□ 0.12
CPSF1-210ENST00000532935 ATXN2Q99700 1313 aaKnown RBP15.76■□□□□ 0.11
CPSF1-210ENST00000532935 A0A0D9SEW6 157 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 ILVBLA1L0T0 632 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 PATE3B3GLJ2 98 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 KHNYNO15037 678 aaKnown RBP15.76■□□□□ 0.11
CPSF1-210ENST00000532935 ATP9BO43861 1147 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 SNAP91O60641 907 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 RNASEH1O60930 286 aaKnown RBP15.76■□□□□ 0.11
CPSF1-210ENST00000532935 LRIG2O94898 1065 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 VAV1P15498 845 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 SDHBP21912 280 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 PSMA2P25787 234 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 KRT83P78385 493 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 TTC31Q49AM3 519 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-210ENST00000532935 EFHC2Q5JST6 749 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 PEAR1Q5VY43 1037 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-210ENST00000532935 SPECC1LQ69YQ0 1117 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 RWDD4Q6NW29 188 aaKnown RBP15.76■□□□□ 0.11
CPSF1-210ENST00000532935 FAM124AQ86V42 546 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 DCAF4L2Q8NA75 395 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 NETO1Q8TDF5 533 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 FRS2Q8WU20 508 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 FOXJ1Q92949 421 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 TBC1D31Q96DN5 1066 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 RETREG1Q9H6L5 497 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 RXFP3Q9NSD7 469 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 DLL3Q9NYJ7 618 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 VPS51Q9UID3 782 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 SCML1Q9UN30 329 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 NEU3Q9UQ49 428 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 SCINQ9Y6U3 715 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 CACNA1EQ15878 2313 aa15.76■□□□□ 0.11
CPSF1-210ENST00000532935 TMEM191CA6NGB0 347 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 MYBL1P10243 752 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 RHOQP17081 205 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 L1CAMP32004 1257 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 HOXD12P35452 270 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 AIF1P55008 147 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 ELAVL3Q14576 367 aaKnown RBP15.75■□□□□ 0.11
CPSF1-210ENST00000532935 PUM1Q14671 1186 aaKnown RBP eCLIP15.75■□□□□ 0.11
CPSF1-210ENST00000532935 DLG2Q15700 870 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 CST6Q15828 149 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 ACCSLQ4AC99 568 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms