RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 TSGA13Q96PP4 275 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 GAD1Q99259 594 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 VAT1Q99536 393 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 SLC38A7Q9NVC3 462 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 PNPOQ9NVS9 261 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 DDIT4Q9NX09 232 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 SLC7A8Q9UHI5 535 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 TRHDEQ9UKU6 1024 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 SOX13Q9UN79 622 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 TIMM13Q9Y5L4 95 aaPredicted RBP8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 NUP205Q92621 2012 aa8.47□□□□□ -1.05
TRIM53BP-201ENST00000532912 NLRC5Q86WI3 1866 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 A0A088AWK7 358 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MYADML2A6NDP7 307 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 CAPN9O14815 690 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MTSS1O43312 755 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 SIN3BO75182 1162 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 F9P00740 461 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MPOP05164 745 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 SBK3P0C264 359 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 C6orf222P0C671 652 aaPredicted RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 RALBP11234 206 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MYL4P12829 197 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 NCAM1P13591 858 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MX2P20592 715 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 SPRP35270 261 aaPredicted RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 NPY2RP49146 381 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 NUMBP49757 651 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 CDK7P50613 346 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 CSE1LP55060 971 aaKnown RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 IRF9Q00978 393 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 KDSRQ06136 332 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 ZNF33AQ06730 810 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MGAT3Q09327 533 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 THOC5Q13769 683 aaKnown RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 RCN2Q14257 317 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 UPP1Q16831 310 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 TRMT5Q32P41 509 aaKnown RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 FAM171BQ6P995 826 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 NAPRTQ6XQN6 538 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 AGMOQ6ZNB7 445 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 LRRC74BQ6ZQY2 392 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 STRA8Q7Z7C7 330 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MRPL10Q7Z7H8 261 aaKnown RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 TAC4Q86UU9 113 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 SCUBE1Q8IWY4 988 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 CNTD1Q8N815 330 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 ACVR1CQ8NER5 493 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 PPP1R14CQ8TAE6 165 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 SHKBP1Q8TBC3 707 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 IRGQQ8WZA9 623 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 MYLPFQ96A32 169 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 SMARCD1Q96GM5 515 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 ZNF419Q96HQ0 510 aaPredicted RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 CLPTM1LQ96KA5 538 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 FAM161BQ96MY7 647 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 PAAF1Q9BRP4 392 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 C1QTNF1Q9BXJ1 281 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 OXCT2Q9BYC2 517 aaPredicted RBP8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 RHOBTB2Q9BYZ6 727 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 TKTL2Q9H0I9 626 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 BFARQ9NZS9 450 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 ZNF212Q9UDV6 495 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 ST3GAL5Q9UNP4 418 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 TRPV2Q9Y5S1 764 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 CDY2AQ9Y6F7 541 aa8.46□□□□□ -1.05
TRIM53BP-201ENST00000532912 SHROOM3Q8TF72 1996 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 MAGEB16A2A368 324 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 ARL5CA6NH57 179 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 NVLO15381 856 aaKnown RBP8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 KLHL2O95198 593 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 C2P06681 752 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 THP07101 528 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 GNAT1P11488 350 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 CPA3P15088 417 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 HOXC13P31276 330 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 SERPINB6P35237 376 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 ITGA7Q13683 1181 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 ITGA9Q13797 1035 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 DLG2Q15700 870 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 FSCN1Q16658 493 aaKnown RBP8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 ARL13BQ3SXY8 428 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 TIGD5Q53EQ6 642 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 HSP90AA5PQ58FG0 334 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 MANEALQ5VSG8 457 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 ITPRIPL1Q6GPH6 555 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 PGM2L1Q6PCE3 622 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 DCLRE1AQ6PJP8 1040 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 EPGNQ6UW88 154 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 RIPOR1Q6ZS17 1223 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 PAXIP1Q6ZW49 1069 aaPredicted RBP8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 BEND5Q7L4P6 421 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 KCNMB4Q86W47 210 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 ARHGAP12Q8IWW6 846 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 KBTBD2Q8IY47 623 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 EDEM1Q92611 657 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 LPPQ93052 612 aa8.46□□□□□ -1.06
TRIM53BP-201ENST00000532912 RILPQ96NA2 401 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms