RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SH3BGRLO75368 114 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 FMO4P31512 558 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 ELK3P41970 407 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 PTENP60484 403 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 CAPRIN2Q6IMN6 1127 aaKnown RBP15.04■□□□□ -0
PCDHA9-202ENST00000532602 CCT7Q99832 543 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 ANKRD6Q9Y2G4 727 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 BUD23O43709 281 aaKnown RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 GSTM1P09488 218 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 CLTBP09497 229 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 FCGR1AP12314 374 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 HDCP19113 662 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 PAGE2BQ5JRK9 111 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 TTC33Q6PID6 262 aaPredicted RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 KDM7AQ6ZMT4 941 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 ASB2Q96Q27 587 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 NDUFS2O75306 463 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 IRAK1P51617 712 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 CXorf40AQ8TE69 158 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 MTFMTQ96DP5 389 aaKnown RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 CPNE1Q99829 537 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 SH3BP4Q9P0V3 963 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 NR5A2O00482 541 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 DNALI1O14645 258 aaPredicted RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 HMGB3O15347 200 aaKnown RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 JAK1P23458 1154 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 RPL21P46778 160 aaKnown RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 CRADDP78560 199 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 ICE2Q659A1 982 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 APOC4-APOC2K7ER74 178 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 APOC2P02655 101 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 CNGA2Q16280 664 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 LRRC49Q8IUZ0 686 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 TDRD5Q8NAT2 981 aaKnown RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 RIN3Q8TB24 985 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 BPIFA1Q9NP55 256 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 FAM105AQ9NUU6 356 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 VTI1BQ9UEU0 232 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 KLRC4O43908 158 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 CXCL14O95715 111 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 TYMPP19971 482 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 GRK4P32298 578 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 RAD23AP54725 363 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 TRIP4Q15650 581 aaPredicted RBP15.03■□□□□ -0
PCDHA9-202ENST00000532602 EML3Q32P44 896 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 SCARA3Q6AZY7 606 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 CYP4Z2PQ8N1L4 340 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 OR12D3Q9UGF7 316 aa15.03■□□□□ -0
PCDHA9-202ENST00000532602 ZNF682O95780 498 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 VAPBO95292 243 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 CNPP09543 421 aaKnown RBP15.02■□□□□ -0
PCDHA9-202ENST00000532602 OR4Q2P0C623 313 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 AQP5P55064 265 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 PRR23CQ6ZRP0 262 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 MARK2Q7KZI7 788 aaKnown RBP15.02■□□□□ -0
PCDHA9-202ENST00000532602 OTOP2Q7RTS6 562 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 CAMKK1Q8N5S9 505 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 NAT16Q8N8M0 369 aa15.02■□□□□ -0
PCDHA9-202ENST00000532602 FAM220BPB1ANY3 271 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 VPS4BO75351 444 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 CYP7B1O75881 506 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 EIF2S1P05198 315 aaKnown RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 TKTP29401 623 aaKnown RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 ABCG1P45844 678 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 MAMLD1Q13495 774 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 ATP13A4Q4VNC1 1196 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 DPP10Q8N608 796 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 LRRC39Q96DD0 335 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 SMAD5Q99717 465 aaKnown RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 ARF4P18085 180 aaPredicted RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 SSTR1P30872 391 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 GPR15P49685 360 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 KCNMA1Q12791 1236 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 ALFQ53S48 1182 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 TRAPPC5Q8IUR0 188 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 CHST7Q9NS84 486 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 VAV3Q9UKW4 847 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 GTF2A1LQ9UNN4 478 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 ATRNO75882 1429 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 TRIM13O60858 407 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 TRUB2O95900 331 aaKnown RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 FYNP06241 537 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 PABPC1P11940 636 aaKnown RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 DGKAP23743 735 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 RRP1BQ14684 758 aaKnown RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 NCF4Q15080 339 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 MIIPQ5JXC2 388 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 PPP1R26Q5T8A7 1209 aaPredicted RBP15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 SPRYD7Q5W111 196 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 LRP10Q7Z4F1 713 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 SH3RF1Q7Z6J0 888 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 UBE2E3Q969T4 207 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 BBS4Q96RK4 519 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 OSBPL6Q9BZF3 934 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 RAD21L1Q9H4I0 556 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 CAAP1Q9H8G2 361 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 GIT1Q9Y2X7 761 aa15.02□□□□□ -0.01
PCDHA9-202ENST00000532602 QSOX1O00391 747 aa15.01□□□□□ -0.01
PCDHA9-202ENST00000532602 CCNE2O96020 404 aa15.01□□□□□ -0.01
PCDHA9-202ENST00000532602 ASGR1P07306 291 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms