RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TNNT1P13805 278 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 TYRP14679 529 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 ERCC2P18074 760 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 SERPINB6P35237 376 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 ETFBP38117 255 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 NDST2P52849 883 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 VCPP55072 806 aaKnown RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 RPS24P62847 133 aaKnown RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 SEL1L2Q5TEA6 688 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 DCAF12L1Q5VU92 463 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 RWDD4Q6NW29 188 aaKnown RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 TPGS1Q6ZTW0 290 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 UBALD2Q8IYN6 164 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 UMODL1-AS1Q8N2C9 162 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 PCDH19Q8TAB3 1148 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 ZFYVE19Q96K21 471 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 WDR24Q96S15 920 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 MAK16Q9BXY0 300 aaKnown RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 MAGEB5Q9BZ81 275 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 TTC7AQ9ULT0 858 aaPredicted RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 SNX12Q9UMY4 172 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 SLC27A6Q9Y2P4 619 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 RAD54BQ9Y620 910 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 DOCK4Q8N1I0 1966 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 ILVBLA1L0T0 632 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 NEDD8-MDP1E9PL57 170 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 PI4K2BG5E9Z4 385 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 J3QL48 77 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 KCNK3O14649 394 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 ENC1O14682 589 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 ZNF500O60304 480 aaPredicted RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 TSPAN3O60637 253 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 CNTN5O94779 1100 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 TJP3O95049 919 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 PYGMP11217 842 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 TGM2P21980 687 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 CASQ1P31415 396 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 GJA4P35212 333 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 SGSHP51688 502 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 PLK1P53350 603 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 TNK2Q07912 1038 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 DMC1Q14565 340 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 PAFAH1B3Q15102 231 aaKnown RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 GAB4Q2WGN9 574 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 ANO4Q32M45 955 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 ALFQ53S48 1182 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 AFMIDQ63HM1 303 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 KIAA0907Q7Z7F0 614 aaPredicted RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 RALGPS2Q86X27 583 aaPredicted RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 LRRC49Q8IUZ0 686 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 CCDC50Q8IVM0 306 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
COPB1-208ENST00000532088 GJD3Q8N144 294 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 CFAP52Q8N1V2 620 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 WFIKKN2Q8TEU8 576 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 GLMNQ92990 594 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 LMLNQ96KR4 655 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 OSBPL8Q9BZF1 889 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 KLHL11Q9NVR0 708 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 MPP6Q9NZW5 540 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 KIAA1522Q9P206 1035 aaPredicted RBP12.84□□□□□ -0.35
COPB1-208ENST00000532088 RNF14Q9UBS8 474 aa12.84□□□□□ -0.35
COPB1-208ENST00000532088 COL4A3Q01955 1670 aa12.83□□□□□ -0.35
COPB1-208ENST00000532088 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 H0Y626 953 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 APOL1O14791 398 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 ZNF189O75820 626 aaPredicted RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 OR1E1P30953 314 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 NR2C2P49116 596 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 CDH18Q13634 790 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 E2F5Q15329 346 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 PARP15Q460N3 678 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 NCBP2-AS2Q69YL0 99 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 CXorf57Q6NSI4 855 aaKnown RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 SYT10Q6XYQ8 523 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 BZW1Q7L1Q6 419 aaKnown RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 RNF135Q8IUD6 432 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 RASGEF1CQ8N431 466 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 PQLC3Q8N755 202 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 ST13P5Q8NFI4 369 aaPredicted RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 P2RY11Q96G91 374 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 C16orf45Q96MC5 204 aaPredicted RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 OSBPL9Q96SU4 736 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 NAP1L3Q99457 506 aaPredicted RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 FRMD8P1Q9BZ68 369 aaPredicted RBP12.83□□□□□ -0.36
COPB1-208ENST00000532088 KLC2Q9H0B6 622 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 MAGEH1Q9H213 219 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 LRRC19Q9H756 370 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 GTSE1Q9NYZ3 720 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 WNT16Q9UBV4 365 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms