RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TNPO2O14787 897 aaKnown RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 VNN1O95497 513 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 MLYCDO95822 493 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 CLEC3BP05452 202 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 CYP3A4P08684 503 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 IL6RP08887 468 aaPredicted RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 WEE2P0C1S8 567 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3HP0C7X1 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 UBL4AP11441 157 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 LAMP2P13473 410 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 AKR1B1P15121 316 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 EPHA8P29322 1005 aaPredicted RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 LIPAP38571 399 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 ARHGAP25P42331 645 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 GPD2P43304 727 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 PCP4P48539 62 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 RCAN1P53805 252 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 RNASELQ05823 741 aaKnown RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 PTP4A2Q12974 167 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 THOC5Q13769 683 aaKnown RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 TBCEQ15813 527 aaPredicted RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 ST3GAL2Q16842 350 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 CCDC184Q52MB2 194 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 KLHL22Q53GT1 634 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 AARS2Q5JTZ9 985 aaKnown RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 ARMC3Q5W041 872 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3GQ6DHY5 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3CQ6IPX1 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TMCO3Q6UWJ1 677 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 ZNF804AQ7Z570 1209 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3Q8IZP1 549 aaPredicted RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 ADSSL1Q8N142 457 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 NPIPB3Q92617 1050 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 ARRDC3Q96B67 414 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 RSPRY1Q96DX4 576 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 MASTLQ96GX5 879 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 FAR2Q96K12 515 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 ITPAQ9BY32 194 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 ARHGAP39Q9C0H5 1083 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 INTS2Q9H0H0 1204 aaKnown RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 DIAPH3Q9NSV4 1193 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 SLC25A10Q9UBX3 287 aaPredicted RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 TRPC5Q9UL62 973 aaPredicted RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 SUFUQ9UMX1 484 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 NOL7Q9UMY1 257 aaKnown RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 SLC12A4Q9UP95 1085 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 SH2B3Q9UQQ2 575 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 SMIM35A0A1B0GVV1 85 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 A0A1W2PRQ8 180 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 A1L4Q6 167 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 SH2D7A6NKC9 451 aaPredicted RBP4.79□□□□□ -1.64
USP47-211ENST00000531513 A8MVJ9 347 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 KCNU1A8MYU2 1149 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 GTPBP1O00178 669 aaKnown RBP4.79□□□□□ -1.64
USP47-211ENST00000531513 PSMD9O00233 223 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 AP3D1O14617 1153 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 SLC16A3O15427 465 aaKnown RBP4.79□□□□□ -1.64
USP47-211ENST00000531513 ACP5P13686 325 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 ALADP13716 330 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 PRKCHP24723 683 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 GALNSP34059 522 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 GRK5P34947 590 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 ACTN2P35609 894 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 ARL3P36405 182 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 MLH1P40692 756 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 MMP13P45452 471 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 ALDH1L2Q3SY69 923 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 RILPL1Q5EBL4 403 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 SPECC1Q5M775 1068 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 GRHL2Q6ISB3 625 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 ANKRD16Q6P6B7 361 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 PXKQ7Z7A4 578 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 CAND1Q86VP6 1230 aaKnown RBP4.79□□□□□ -1.64
USP47-211ENST00000531513 RPAP2Q8IXW5 612 aaPredicted RBP4.79□□□□□ -1.64
USP47-211ENST00000531513 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.79□□□□□ -1.64
USP47-211ENST00000531513 GPATCH11Q8N954 259 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 SOCS4Q8WXH5 440 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 USP6NLQ92738 828 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 GLG1Q92896 1179 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 VPS50Q96JG6 964 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 LENG8Q96PV6 779 aaPredicted RBP4.79□□□□□ -1.64
USP47-211ENST00000531513 NPAS1Q99742 590 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
USP47-211ENST00000531513 PRSS22Q9GZN4 317 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 VEZTQ9HBM0 779 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 DLL3Q9NYJ7 618 aa4.79□□□□□ -1.64
USP47-211ENST00000531513 KDM3AQ9Y4C1 1321 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 CCDC187A0A096LP49 1063 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 GOLGA6L10A0A0M3HER8 536 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 SYNDIG1LA6NDD5 238 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 FAM90A7PA6NKC0 464 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 FAM90A22PA8MWA6 464 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 FAM90A12PA8MX19 464 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 FAM90A23PA8MXZ1 464 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 QSOX1O00391 747 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 P4HA2O15460 535 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 CCKBRP32239 447 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 RGS2P41220 211 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 NR4A2P43354 598 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 CLCN2P51788 898 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms