RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 SHOC2Q9UQ13 582 aa10.12□□□□□ -0.79
CTNND1-228ENST00000531007 NEU3Q9UQ49 428 aa10.12□□□□□ -0.79
CTNND1-228ENST00000531007 A0A0A0MRY4 1105 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 CXorf51AA0A1B0GTR3 108 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 CCDC195A0A1B0GUA6 201 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 A0A1W2PRU2 124 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 AP3B1O00203 1094 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 KCNN4O15554 427 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 MFSD11O43934 449 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 IFNB1P01574 187 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 HMBSP08397 361 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 IVDP26440 423 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 AVPR1AP37288 418 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 MAGEA6P43360 314 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 RPL21P46778 160 aaKnown RBP10.11□□□□□ -0.79
CTNND1-228ENST00000531007 KCNQ1P51787 676 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 SARNPP82979 210 aaKnown RBP10.11□□□□□ -0.79
CTNND1-228ENST00000531007 CDK16Q00536 496 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 SLC10A2Q12908 348 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-228ENST00000531007 KCNC3Q14003 757 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 ANO4Q32M45 955 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 LRIT3Q3SXY7 679 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 PRSS36Q5K4E3 855 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 C6orf118Q5T5N4 469 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 RAP1GAP2Q684P5 730 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 ITPRIPL1Q6GPH6 555 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 NPNTQ6UXI9 565 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 SETD3Q86TU7 594 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-228ENST00000531007 NLRP14Q86W24 1093 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 RELL1Q8IUW5 271 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 PPIL6Q8IXY8 311 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 CMTM8Q8IZV2 173 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 FAM71DQ8N9W8 422 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 CCNYQ8ND76 341 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 OTUB2Q96DC9 234 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 SPATA13Q96N96 652 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 DPH5Q9H2P9 285 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 PRDM12Q9H4Q4 367 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 PIDD1Q9HB75 910 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 ZDHHC18Q9NUE0 388 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 ETNK2Q9NVF9 386 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 GRHL1Q9NZI5 618 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 TBC1D14Q9P2M4 693 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 DNMT3BQ9UBC3 853 aaKnown RBP10.11□□□□□ -0.79
CTNND1-228ENST00000531007 ANAPC5Q9UJX4 755 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 AGO1Q9UL18 857 aaKnown RBP10.11□□□□□ -0.79
CTNND1-228ENST00000531007 VANGL2Q9ULK5 521 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 NFU1Q9UMS0 254 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 SNX24Q9Y343 169 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 SH3BP1Q9Y3L3 701 aa10.11□□□□□ -0.79
CTNND1-228ENST00000531007 ANAPC1Q9H1A4 1944 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 A0A1B0GVM2 712 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 GOLGA6CA6NDK9 693 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 GOLGA6BA6NDN3 693 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 TCAF2A6NFQ2 919 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 ERI2A8K979 691 aaKnown RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 SLC9A3R1O14745 358 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 CHADO15335 359 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 EIF3HO15372 352 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 PSMD3O43242 534 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 RAMP2O60895 175 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 GOLGA6DP0CG33 693 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 RBL1P28749 1068 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 ECHS1P30084 290 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 RPL22P35268 128 aaKnown RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 NRIP1P48552 1158 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 PLTPP55058 493 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 AP1B1Q10567 949 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 GPS1Q13098 491 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 FAM133BQ5BKY9 247 aaKnown RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 ARTNQ5T4W7 220 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 GPR158Q5T848 1215 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 IZUMO3Q5VZ72 239 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 TXNDC8Q6A555 127 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 NADSYN1Q6IA69 706 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 HIBCHQ6NVY1 386 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 DENND1CQ8IV53 801 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 CCDC117Q8IWD4 279 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 CCDC13Q8IYE1 715 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 ATPAF2Q8N5M1 289 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 EFHBQ8N7U6 833 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 ARL14EPQ8N8R7 260 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 MAB21L3Q8N8X9 362 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 HJURPQ8NCD3 748 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 VN1R2Q8NFZ6 395 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 SHKBP1Q8TBC3 707 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 NSMCE1Q8WV22 266 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 E2F7Q96AV8 911 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 P2RY11Q96G91 374 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 ZNF599Q96NL3 588 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 MAGEB5Q9BZ81 275 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 TRIM31Q9BZY9 425 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 MAGEH1Q9H213 219 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 EIF2B3Q9NR50 452 aaKnown RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 GOLGA6AQ9NYA3 693 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 IGSF9Q9P2J2 1179 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 MRPS23Q9Y3D9 190 aaKnown RBP10.1□□□□□ -0.79
CTNND1-228ENST00000531007 CPQQ9Y646 472 aa10.1□□□□□ -0.79
CTNND1-228ENST00000531007 DENND4CQ5VZ89 1909 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms