RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MGAT3Q09327 533 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 GPR162Q16538 588 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 KHDC1Q4VXA5 237 aaKnown RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 GDF6Q6KF10 455 aaPredicted RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 FSTL4Q6MZW2 842 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 RFWD3Q6PCD5 774 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 CES3Q6UWW8 571 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 C10orf107Q8IVU9 208 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 OR6Y1Q8NGX8 325 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 EDEM1Q92611 657 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 PPP1R2P1Q96PQ5 205 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 DNAJC28Q9NX36 388 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 AAR2Q9Y312 384 aaKnown RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 MYADML2A6NDP7 307 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 F8W8V4 182 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 USP12O75317 370 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 H2AFYO75367 372 aaKnown RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 ENO1P06733 434 aaKnown RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 RALBP11234 206 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 CPA3P15088 417 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 RABGGTBP53611 331 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 CLNS1AP54105 237 aaKnown RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 HUNKP57058 714 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 EIF4EBP2Q13542 120 aaPredicted RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 BRMS1LQ5PSV4 323 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 TAC4Q86UU9 113 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 LCA5Q86VQ0 697 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 KCNMB4Q86W47 210 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
BRCA2-204ENST00000530893 UROC1Q96N76 676 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 CXorf56Q9H5V9 222 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 SPC25Q9HBM1 224 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 MID2Q9UJV3 735 aa17.57■□□□□ 0.4
BRCA2-204ENST00000530893 M0QZQ0 153 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 ITM2AO43736 263 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 SRGAP2BP0DMP2 458 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 CCNCP24863 283 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 PTDSS1P48651 473 aaKnown RBP17.56■□□□□ 0.4
BRCA2-204ENST00000530893 ABCE1P61221 599 aaKnown RBP17.56■□□□□ 0.4
BRCA2-204ENST00000530893 TUBB3Q13509 450 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 TAF11Q15544 211 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 PPM1JQ5JR12 505 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 CLEC14AQ86T13 490 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 LZTR1Q8N653 840 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 DQX1Q8TE96 717 aaKnown RBP17.56■□□□□ 0.4
BRCA2-204ENST00000530893 STMN2Q93045 179 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 RNF34Q969K3 372 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 HAPLN3Q96S86 360 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 PKMYT1Q99640 499 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 EBF4Q9BQW3 602 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 MCMBPQ9BTE3 642 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 UPF3AQ9H1J1 476 aaKnown RBP17.56■□□□□ 0.4
BRCA2-204ENST00000530893 ARHGEF38Q9NXL2 777 aa17.56■□□□□ 0.4
BRCA2-204ENST00000530893 FGF10O15520 208 aaPredicted RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 B3GAT3O94766 335 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 APOA4P06727 396 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 CTSHP09668 335 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 ALDH18A1P54886 795 aaKnown RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 NKX3-2P78367 333 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 GRIK3Q13003 919 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 MPP3Q13368 585 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 OLIG2Q13516 323 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 KPNB1Q14974 876 aaKnown RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 ACSBG2Q5FVE4 666 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 PDPK2PQ6A1A2 396 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 CXCL17Q6UXB2 119 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 RASAL3Q86YV0 1011 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 CCDC117Q8IWD4 279 aaPredicted RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 RBM15BQ8NDT2 890 aaKnown RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 MFSD3Q96ES6 412 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 NAF1Q96HR8 494 aaKnown RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 ZNF778Q96MU6 729 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 SORT1Q99523 831 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 PAAF1Q9BRP4 392 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 IL1RAPL1Q9NZN1 696 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 A0A0U1RQF3 1178 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 TMEM114B3SHH9 223 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 H0Y3Z8 333 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 TM7SF2O76062 418 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 JCHAINP01591 159 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 BDNFP23560 247 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 DNAJB1P25685 340 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 INHBEP58166 350 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 HSP90AA5PQ58FG0 334 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 RABGAP1LQ5R372 815 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 CERCAMQ5T4B2 595 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 C6orf163Q5TEZ5 329 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 CST9Q5W186 159 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 NET1Q7Z628 596 aaPredicted RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 THEM5Q8N1Q8 247 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 URGCPQ8TCY9 931 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 KIFC1Q9BW19 673 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 ABCC13Q9NSE7 274 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 C20orf96Q9NUD7 363 aaPredicted RBP17.55■□□□□ 0.4
BRCA2-204ENST00000530893 PLA2G4CQ9UP65 541 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 PCDHB12Q9Y5F1 795 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 CDY1Q9Y6F8 540 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 PATJQ8NI35 1801 aa17.55■□□□□ 0.4
BRCA2-204ENST00000530893 SHROOM3Q8TF72 1996 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 A0A096LPK6 155 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms