RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PRPSAP2O60256 369 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 ZNF217O75362 1048 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 LRCH4O75427 683 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 PCK1P35558 622 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 NNMTP40261 264 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 MAPKAPK2P49137 400 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 NUMBP49757 651 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 STK19P49842 368 aaPredicted RBP13□□□□□ -0.33
CCDC90B-216ENST00000529856 KRT83P78385 493 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 PIGHQ14442 188 aaPredicted RBP13□□□□□ -0.33
CCDC90B-216ENST00000529856 HNRNPA1L2Q32P51 320 aaKnown RBP13□□□□□ -0.33
CCDC90B-216ENST00000529856 C9orf64Q5T6V5 341 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 PRCCQ92733 491 aaPredicted RBP13□□□□□ -0.33
CCDC90B-216ENST00000529856 SIPA1Q96FS4 1042 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 LOXL4Q96JB6 756 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 BTBD6Q96KE9 485 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 PEBP4Q96S96 227 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 C2orf49Q9BVC5 232 aaPredicted RBP13□□□□□ -0.33
CCDC90B-216ENST00000529856 PACSIN1Q9BY11 444 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 MTG2Q9H4K7 406 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 FBRSQ9HAH7 460 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 ITM2CQ9NQX7 267 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 SPTLC3Q9NUV7 552 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 NDFIP2Q9NV92 336 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 TMEM248Q9NWD8 314 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 GPATCH2LQ9NWQ4 482 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 UVRAGQ9P2Y5 699 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 IP6K2Q9UHH9 426 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 MBD1Q9UIS9 605 aaPredicted RBP13□□□□□ -0.33
CCDC90B-216ENST00000529856 ANAPC7Q9UJX3 599 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 USP18Q9UMW8 372 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 AP4E1Q9UPM8 1137 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 ABCA7Q8IZY2 2146 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 EDDM13A0A1B0GTR0 161 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 TARSL2A2RTX5 802 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 MYO1FO00160 1098 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 ATP9BO43861 1147 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 CREB3O43889 395 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 SIN3BO75182 1162 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 RHOBTB1O94844 696 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 TMEM253P0C7T8 217 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 BCKDHBP21953 392 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 EPHB2P29323 1055 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 HTR7P34969 479 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 GNA12Q03113 381 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 ELF2Q15723 593 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 CA9Q16790 459 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 KIAA1324Q6UXG2 1013 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 CYP4V2Q6ZWL3 525 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 PSTKQ8IV42 348 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 NIPA2Q8N8Q9 360 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 OR7D4Q8NG98 312 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 ZNF564Q8TBZ8 553 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 FRS2Q8WU20 508 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 CTNNBL1Q8WYA6 563 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 PTPRN2Q92932 1015 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 SPACA7Q96KW9 195 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 EPAS1Q99814 870 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 SPON2Q9BUD6 331 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 SNRNP25Q9BV90 132 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 ACE2Q9BYF1 805 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 RSPH9Q9H1X1 276 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 DHX35Q9H5Z1 703 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 NCDNQ9UBB6 729 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 DNAI1Q9UI46 699 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 VPS51Q9UID3 782 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 SLC25A13Q9UJS0 675 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 PIEZO1Q92508 2521 aa12.99□□□□□ -0.33
CCDC90B-216ENST00000529856 THADAQ6YHU6 1953 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 CHD5Q8TDI0 1954 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 GPR179Q6PRD1 2367 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 OTOGLQ3ZCN5 2332 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 IGHV1OR15-9A0A0B4J2B8 117 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 WASH4PA8MWX3 477 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 MAP3K13O43283 966 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 SNAP91O60641 907 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 ZMPSTE24O75844 475 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 MT-CO1P00395 513 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 RETP07949 1114 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 IL1R2P27930 398 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 ETFBP38117 255 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 RPS14P62263 151 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 DLG2Q15700 870 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 BOLA3Q53S33 107 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 DAB2IPQ5VWQ8 1189 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 PMS2CLQ68D20 193 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 SLC36A4Q6YBV0 504 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 DCLK2Q8N568 766 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 SH2D3CQ8N5H7 860 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 RTL3Q8N8U3 475 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 PANX2Q96RD6 677 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 FAM129BQ96TA1 746 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 MAGEH1Q9H213 219 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 CATSPERBQ9H7T0 1116 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms