RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ENOSF1Q7L5Y1 443 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 C12orf40Q86WS4 652 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 FAM114A1Q8IWE2 563 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 PHTF2Q8N3S3 785 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 DEFB119Q8N690 84 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 SHC3Q92529 594 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 ZNF837Q96EG3 531 aaPredicted RBP8.82□□□□□ -1
SSBP3-212ENST00000528930 P2RY11Q96G91 374 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 HSPA12BQ96MM6 686 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 NACA2Q9H009 215 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 NDST4Q9H3R1 872 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 GAREM1Q9H706 876 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 LRRC4Q9HBW1 653 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 AJAP1Q9UKB5 411 aaPredicted RBP8.82□□□□□ -1
SSBP3-212ENST00000528930 NFE2L3Q9Y4A8 694 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 CELSR2Q9HCU4 2923 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 CRYBG3Q68DQ2 2970 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 MTORP42345 2549 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 ADGRG4Q8IZF6 3080 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 KCNJ18B7U540 433 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 K7EQS6 105 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 M0QYV0 167 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 MBD3O95983 291 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 KLKB1P03952 638 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 ADH5P11766 374 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 KRT5P13647 590 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 LCP1P13796 627 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 EEF1GP26641 437 aaKnown RBP8.81□□□□□ -1
SSBP3-212ENST00000528930 MATKP42679 507 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 RGS7P49802 495 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 BNC1Q01954 994 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 GAD2Q05329 585 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 EFEMP1Q12805 493 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 KCNJ12Q14500 433 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 DBN1Q16643 649 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 ARHGAP44Q17R89 818 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 SKOR2Q2VWA4 1001 aaPredicted RBP8.81□□□□□ -1
SSBP3-212ENST00000528930 LINC00303Q3SY05 128 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 HS1BP3Q53T59 392 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 TCP11X2Q5H9J9 407 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 CDKAL1Q5VV42 579 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 BSPRYQ5W0U4 402 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 DENND1BQ6P3S1 775 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 C11orf57Q6ZUT1 292 aaPredicted RBP8.81□□□□□ -1
SSBP3-212ENST00000528930 TADA2BQ86TJ2 420 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 TMEM25Q86YD3 366 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 SFTPA1Q8IWL2 248 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 DHX40Q8IX18 779 aaKnown RBP8.81□□□□□ -1
SSBP3-212ENST00000528930 ETFBKMTQ8IXQ9 262 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 ARHGAP18Q8N392 663 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 CLEC4CQ8WTT0 213 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 ZNF606Q8WXB4 792 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 NAF1Q96HR8 494 aaKnown RBP8.81□□□□□ -1
SSBP3-212ENST00000528930 HSFY1Q96LI6 401 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 FAM81BQ96LP2 452 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 CDK5RAP1Q96SZ6 601 aaKnown RBP8.81□□□□□ -1
SSBP3-212ENST00000528930 SEMA3CQ99985 751 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 ZMYND15Q9H091 742 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 CNGB3Q9NQW8 809 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 SPHK2Q9NRA0 654 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 TMEM63CQ9P1W3 806 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 CYTH4Q9UIA0 394 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 DNAJC12Q9UKB3 198 aa8.81□□□□□ -1
SSBP3-212ENST00000528930 CELSR1Q9NYQ6 3014 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 HIVEP1P15822 2718 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 FOXN3O00409 490 aaPredicted RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 PIK3R2O00459 728 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 HOXC11O43248 304 aaPredicted RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 LETM1O95202 739 aaPredicted RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 CDK4P11802 303 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 GNSP15586 552 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 GNA15P30679 374 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 COG7P83436 770 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 NCAPHQ15003 741 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 MEA1Q16626 185 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 CCDC157Q569K6 752 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 CCDC183Q5T5S1 534 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 HES3Q5TGS1 186 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 BTBD8Q5XKL5 378 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 FBXL19Q6PCT2 694 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 SASS6Q6UVJ0 657 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 MTERF4Q7Z6M4 381 aaKnown RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 MIB1Q86YT6 1006 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 SIX6OS1Q8N1H7 587 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 CACTIN-AS1Q8N1I8 211 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 WDTC1Q8N5D0 677 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 CCDC33Q8N5R6 958 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 NAT16Q8N8M0 369 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 STK32AQ8WU08 396 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 KCNE4Q8WWG9 221 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 IRGQQ8WZA9 623 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 EDEM1Q92611 657 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 ZNF419Q96HQ0 510 aaPredicted RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 ZNF578Q96N58 590 aaPredicted RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 PNKPQ96T60 521 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 NAA15Q9BXJ9 866 aaKnown RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 DPH1Q9BZG8 443 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 ABCC13Q9NSE7 274 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms