RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
CMTM1-211ENST00000528484 BTN2A3PQ96KV6 586 aa11.92□□□□□ -0.5
CMTM1-211ENST00000528484 FCRL2Q96LA5 508 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-211ENST00000528484 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
CMTM1-211ENST00000528484 ABCG4Q9H172 646 aa11.92□□□□□ -0.5
CMTM1-211ENST00000528484 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-211ENST00000528484 SLCO3A1Q9UIG8 710 aa11.92□□□□□ -0.5
CMTM1-211ENST00000528484 NEMP2A6NFY4 417 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 WNT9AO14904 365 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 PLRG1O43660 514 aaKnown RBP11.91□□□□□ -0.5
CMTM1-211ENST00000528484 SIGLEC6O43699 453 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 THEGLP0DJG4 465 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 SLC2A3P11169 496 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 PDGFRAP16234 1089 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 AKT2P31751 481 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 STK19P49842 368 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-211ENST00000528484 NDUFA8P51970 172 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 MCCD1P59942 119 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-211ENST00000528484 GABREP78334 506 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 PKDCCQ504Y2 493 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 RAP1GAP2Q684P5 730 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 KRBA2Q6ZNG9 492 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 ERICH1Q86X53 443 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
CMTM1-211ENST00000528484 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 KCNE4Q8WWG9 221 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 WBP1Q96G27 269 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 USP29Q9HBJ7 922 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 PREBQ9HCU5 417 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 DYRK4Q9NR20 520 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 THSD1Q9NS62 852 aa11.91□□□□□ -0.5
CMTM1-211ENST00000528484 NYNRINQ9P2P1 1898 aaKnown RBP11.91□□□□□ -0.5
CMTM1-211ENST00000528484 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-211ENST00000528484 A0A1B0GVM2 712 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 ALOX15BO15296 676 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 RTN2O75298 545 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 TACR2P21452 398 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
CMTM1-211ENST00000528484 DRD3P35462 400 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 ERVPABLB-1P60509 514 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 MTA1Q13330 715 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 STIM1Q13586 685 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 BEND5Q7L4P6 421 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 TMC6Q7Z403 805 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 OR4C6Q8NH72 309 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 ERCC4Q92889 916 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-211ENST00000528484 SNX21Q969T3 373 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 SLC39A13Q96H72 371 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 MED15Q96RN5 788 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 DUSP23Q9BVJ7 150 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.5
CMTM1-211ENST00000528484 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 POPDC2Q9HBU9 364 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 METTL14Q9HCE5 456 aaKnown RBP11.9□□□□□ -0.5
CMTM1-211ENST00000528484 KLHL11Q9NVR0 708 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.9□□□□□ -0.5
CMTM1-211ENST00000528484 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
CMTM1-211ENST00000528484 TENM4Q6N022 2769 aa11.9□□□□□ -0.51
CMTM1-211ENST00000528484 TRIM38O00635 465 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 FFAR2O15552 330 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 MED7O43513 233 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 BNIP3LO60238 219 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 USP12O75317 370 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 MPOP05164 745 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 GP1BAP07359 652 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 CKMT1AP12532 417 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 DGKAP23743 735 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 KCNMA1Q12791 1236 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 CNTN1Q12860 1018 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 POM121L1PQ3SYA9 428 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
CMTM1-211ENST00000528484 ARHGAP40Q5TG30 622 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 KANSL1Q7Z3B3 1105 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 TAC4Q86UU9 113 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 SMYD4Q8IYR2 804 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-211ENST00000528484 CCAR2Q8N163 923 aaKnown RBP11.89□□□□□ -0.51
CMTM1-211ENST00000528484 FAM174AQ8TBP5 190 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 TFAP2BQ92481 460 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 CCDC97Q96F63 343 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-211ENST00000528484 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-211ENST00000528484 CALN1Q9BXU9 219 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 POLR1BQ9H9Y6 1135 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 NCKIPSDQ9NZQ3 722 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 COL6A6A6NMZ7 2263 aa11.89□□□□□ -0.51
CMTM1-211ENST00000528484 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 KCNU1A8MYU2 1149 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 C10orf142B7Z368 130 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 H3BM21 787 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 MCF2LO15068 1137 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms