RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PABPC3	Q9H361	631 aa	Known RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	CAPN10	Q9HC96	672 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	AIPL1	Q9NZN9	384 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	SERGEF	Q9UGK8	458 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	NEU3	Q9UQ49	428 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	SPAG17	Q6Q759	2223 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362		A0A0D9SEW6	157 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	C4orf47	A7E2U8	309 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	METTL12	A8MUP2	240 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	MEI4	A8MW99	385 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	CCP110	O43303	1012 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	ATP9B	O43861	1147 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	SNAP91	O60641	907 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	SERPINF2	P08697	491 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	ENG	P17813	658 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	TNFAIP3	P21580	790 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	GPD1	P21695	349 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	PRKCI	P41743	596 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	ZNF143	P52747	638 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	RPL7A	P62424	266 aa	Known RBP	12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	NRG1	Q02297	640 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	ELAVL3	Q14576	367 aa	Known RBP	12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	CST6	Q15828	149 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	FIGN	Q5HY92	759 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	WDR45B	Q5MNZ6	344 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	DCAF12L1	Q5VU92	463 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	SFMBT2	Q5VUG0	894 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	RABEPK	Q7Z6M1	372 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	DNAAF5	Q86Y56	855 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	MMAA	Q8IVH4	418 aa	Known RBP	12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	RGL4	Q8IZJ4	473 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	CCDC185	Q8N715	623 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	DCAF4L2	Q8NA75	395 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	PPP1R9B	Q96SB3	815 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	MAGEB5	Q9BZ81	275 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	EDEM3	Q9BZQ6	932 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	ZYG11B	Q9C0D3	744 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	BTBD1	Q9H0C5	482 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	PCED1A	Q9H1Q7	454 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	HAUS4	Q9H6D7	363 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	TMEM9B	Q9NQ34	198 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	PPARGC1A	Q9UBK2	798 aa	Known RBP	12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	VPS51	Q9UID3	782 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	SLC25A13	Q9UJS0	675 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	SLC6A14	Q9UN76	642 aa		12.07	□□□□□ -0.48
PSMC3-205	ENST00000528362	SPTBN2	O15020	2390 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362		A0A1W2PP55	124 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	TMCO5B	A8MYB1	307 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	FAM72C	H0Y354	149 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	DDX3X	O00571	662 aa	Known RBP eCLIP	12.06	□□□□□ -0.48	2e-14	■□□□□ 11
PSMC3-205	ENST00000528362	MID1	O15344	667 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	ATMIN	O43313	823 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	RNASEH1	O60930	286 aa	Known RBP	12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	SEMA4F	O95754	770 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	MT-CO1	P00395	513 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	OR1E1	P30953	314 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	NNMT	P40261	264 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	MAPK8	P45983	427 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	PSMD8	P48556	350 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	METAP1	P53582	386 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	UBASH3A	P57075	661 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	OGDH	Q02218	1023 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	KLHL30	Q0D2K2	578 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	SCAP	Q12770	1279 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	DLG2	Q15700	870 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	ARL13B	Q3SXY8	428 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	C6orf118	Q5T5N4	469 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	FAM72A	Q5TYM5	149 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	FAM72D	Q6L9T8	149 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362		Q6ZVU0	165 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	USP30	Q70CQ3	517 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	NLRP14	Q86W24	1093 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	FAM72B	Q86X60	149 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	SH2D3C	Q8N5H7	860 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	AADAT	Q8N5Z0	425 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	OR7D4	Q8NG98	312 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	NTAN1	Q96AB6	310 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	OSBPL2	Q9H1P3	480 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	FBXL12	Q9NXK8	326 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	OR12D3	Q9UGF7	316 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	SUSD2	Q9UGT4	822 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	SCML1	Q9UN30	329 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	HS3ST2	Q9Y278	367 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	SLCO1B1	Q9Y6L6	691 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362	CKAP5	Q14008	2032 aa		12.06	□□□□□ -0.48
PSMC3-205	ENST00000528362		A0A1W2PQJ5	194 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	ILVBL	A1L0T0	632 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	GOLGA6L19	H0YKK7	550 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362		K7ERQ8	282 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	LRIG2	O94898	1065 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	PLEK	P08567	350 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	SKIL	P12757	684 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	SRC	P12931	536 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	GNS	P15586	552 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	GLDC	P23378	1020 aa		12.05	□□□□□ -0.48
PSMC3-205	ENST00000528362	SLC8A1	P32418	973 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms