RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 KLHL30Q0D2K2 578 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 CDO1Q16878 200 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 TRIM61Q5EBN2 209 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 C6orf118Q5T5N4 469 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 STPG1Q5TH74 334 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 TCEAL6Q6IPX3 200 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 DNAJC24Q6P3W2 148 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 DEFB119Q8N690 84 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 OR52K2Q8NGK3 314 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 FAM172AQ8WUF8 416 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 TCEAL3Q969E4 200 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 HSPA12BQ96MM6 686 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 FAM129BQ96TA1 746 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 C2orf49Q9BVC5 232 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 GPR174Q9BXC1 333 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 MUC3BQ9H195 1237 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 MTG2Q9H4K7 406 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 SGK2Q9HBY8 427 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 TMPRSS4Q9NRS4 437 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 MPP6Q9NZW5 540 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 OR12D3Q9UGF7 316 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 SUSD2Q9UGT4 822 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 SLC25A13Q9UJS0 675 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 SLC6A14Q9UN76 642 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 NCKAP1Q9Y2A7 1128 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 SNX10Q9Y5X0 201 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 ADAMTS9Q9P2N4 1935 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 NUMA1Q14980 2115 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 CXorf51AA0A1B0GTR3 108 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 LNP1A1A4G5 178 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 ILVBLA1L0T0 632 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 PATE3B3GLJ2 98 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 SERPINF2P08697 491 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 GNSP15586 552 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 DESP17661 470 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 RRM1P23921 792 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 OR1E1P30953 314 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 STK19P49842 368 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 AIF1P55008 147 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 SCAPQ12770 1279 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 ELAVL3Q14576 367 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 MANEALQ5VSG8 457 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 IL31Q6EBC2 164 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 PLEKHA7Q6IQ23 1121 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 LRSAM1Q6UWE0 723 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 ZNF571Q7Z3V5 609 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 SLFN11Q7Z7L1 901 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 RGL4Q8IZJ4 473 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 SH2D3CQ8N5H7 860 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 FRS2Q8WU20 508 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 CNPY3Q9BT09 278 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 EDEM2Q9BV94 578 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 BTBD1Q9H0C5 482 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 PABPC3Q9H361 631 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 PARVAQ9NVD7 372 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 TAS2R14Q9NYV8 317 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 ZNF212Q9UDV6 495 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 CAPN11Q9UMQ6 739 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 HS3ST2Q9Y278 367 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 WDR87Q6ZQQ6 2873 aa12.43□□□□□ -0.42
TRAPPC4-209ENST00000528230 DDX3XO00571 662 aaKnown RBP eCLIP12.42□□□□□ -0.428e-12■■■■□ 21.2
TRAPPC4-209ENST00000528230 ALOX15BO15296 676 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 RTN2O75298 545 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 TPM3P06753 285 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 PLEKP08567 350 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 C5AR1P21730 350 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 L1CAMP32004 1257 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 SLC8A1P32418 973 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 ACSL1P33121 698 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 ETFBP38117 255 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 CLCN6P51797 869 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 ZBED6P86452 979 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 GFPT1Q06210 699 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 SLC20A2Q08357 652 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 MAMLD1Q13495 774 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 DLG2Q15700 870 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 CST6Q15828 149 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 DCAF12L1Q5VU92 463 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 DAB2IPQ5VWQ8 1189 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 E4F1Q66K89 784 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 DSG4Q86SJ6 1040 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 CACUL1Q86Y37 369 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 MMAAQ8IVH4 418 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 STK40Q8N2I9 435 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 DCAF4L2Q8NA75 395 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 MCEEQ96PE7 176 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 PSMB7Q99436 277 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 CAPN10Q9HC96 672 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 TMEM9BQ9NQ34 198 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 FBXL12Q9NXK8 326 aa12.42□□□□□ -0.42
TRAPPC4-209ENST00000528230 IFNKQ9P0W0 207 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms