RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 EBF1Q9UH73 591 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 A0A0A0MRY4 1105 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 KANSL1LA0AUZ9 987 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 VDRP11473 427 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 HK2P52789 917 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 IRF9Q00978 393 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 GRAMD4Q6IC98 578 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 ELMSAN1Q6PJG2 1045 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 NCCRP1Q6ZVX7 275 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-214ENST00000528165 STRA8Q7Z7C7 330 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 LZTR1Q8N653 840 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 COLGALT1Q8NBJ5 622 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 SPATA13Q96N96 652 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 AGAP3Q96P47 875 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 RBBP8Q99708 897 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 PRDM16Q9HAZ2 1276 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 MID2Q9UJV3 735 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 BARX2Q9UMQ3 279 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-214ENST00000528165 ZNF232Q9UNY5 417 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
CAPN1-214ENST00000528165 PIGNO95427 931 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 MPOP05164 745 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 MCF2P10911 925 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 TFEBP19484 476 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 HMOX2P30519 316 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 MAGEA12P43365 314 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 ACADVLP49748 655 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 GPR180Q86V85 440 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 FIBCD1Q8N539 461 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 MOCOSQ96EN8 888 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 COX4I2Q96KJ9 171 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 ZNF385DQ9H6B1 395 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 MRPL40Q9NQ50 206 aaKnown RBP14.94□□□□□ -0.02
CAPN1-214ENST00000528165 ACSS2Q9NR19 701 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 OXSMQ9NWU1 459 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 DPYSL4O14531 572 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 B4GALT4O60513 344 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 ZNF189O75820 626 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-214ENST00000528165 IDO1P14902 403 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 RGS7P49802 495 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 LIMK2P53671 638 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 SLC5A3P53794 718 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 TRIM25Q14258 630 aaKnown RBP14.94□□□□□ -0.02
CAPN1-214ENST00000528165 MTX3Q5HYI7 312 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 FSTL4Q6MZW2 842 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 ISL2Q96A47 359 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 C12orf43Q96C57 262 aaKnown RBP14.94□□□□□ -0.02
CAPN1-214ENST00000528165 CIB1Q99828 191 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 CAB39LQ9H9S4 337 aa14.94□□□□□ -0.02
CAPN1-214ENST00000528165 A0A087WXM4 84 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PRKCBP05771 671 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 C8BP07358 591 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 TFPTP0C1Z6 253 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 GRIA4P48058 902 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 CCR3P51677 355 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 RAB15P59190 212 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PRKAA1Q13131 559 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 DLG2Q15700 870 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 ANKDD1AQ495B1 522 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PDCD4Q53EL6 469 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 ARL13AQ5H913 290 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 HACE1Q8IYU2 909 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 FAM47BQ8NA70 645 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 THAP11Q96EK4 314 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 SLC29A1Q99808 456 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 ANKRD60Q9BZ19 345 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 DRC3Q9H069 523 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PAIP1Q9H074 479 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 SUCOQ9UBS9 1254 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 VTI1BQ9UEU0 232 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 ZNF487B1APH4 448 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 SPATA31C2B4DYI2 1134 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 C9IYK1 514 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 SLCO1B7G3V0H7 640 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 ZNF701M0R085 212 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 GRID2O43424 1007 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 HTRA2O43464 458 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 CCR10P46092 362 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PSME3P61289 254 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PRAMEP78395 509 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 RHDQ02161 417 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 TMEM132AQ24JP5 1023 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 ZBED5Q49AG3 693 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 SPANXN3Q5MJ09 141 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 RWDD4Q6NW29 188 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 BORCS5Q969J3 196 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PPWD1Q96BP3 646 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 NIFKQ9BYG3 293 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PCDHAC1Q9H158 963 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 EIF2B3Q9NR50 452 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 DTLQ9NZJ0 730 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 SIX4Q9UIU6 781 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 MYO18AQ92614 2054 aaKnown RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 PSMD12O00232 456 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-214ENST00000528165 SPIDRQ14159 915 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 CLEC14AQ86T13 490 aa14.93□□□□□ -0.02
CAPN1-214ENST00000528165 HERC6Q8IVU3 1022 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms