RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 DCAF4L2Q8NA75 395 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 JOSD2Q8TAC2 188 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 NTAN1Q96AB6 310 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 RPL10LQ96L21 214 aaKnown RBP21.18■□□□□ 0.98
VPS28-206ENST00000526734 SYT11Q9BT88 431 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 ZDHHC5Q9C0B5 715 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 ZYG11BQ9C0D3 744 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 OSBPL2Q9H1P3 480 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 AIPL1Q9NZN9 384 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 FZD4Q9ULV1 537 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 TPX2Q9ULW0 747 aaKnown RBP21.18■□□□□ 0.98
VPS28-206ENST00000526734 A0A1B0GTW7 788 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 C4orf47A7E2U8 309 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 ALOX15BO15296 676 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 CNTN5O94779 1100 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 SEMA4FO95754 770 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 RFC1P35251 1148 aaPredicted RBP21.17■□□□□ 0.98
VPS28-206ENST00000526734 ADRA1BP35368 520 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 ETFBP38117 255 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 PRKCIP41743 596 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 STK19P49842 368 aaPredicted RBP21.17■□□□□ 0.98
VPS28-206ENST00000526734 NR1I3Q14994 352 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 CDO1Q16878 200 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 ALFQ53S48 1182 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 DCAF12L1Q5VU92 463 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 SFMBT2Q5VUG0 894 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 FAM124AQ86V42 546 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 PTPRN2Q92932 1015 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 MTG2Q9H4K7 406 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 HS3ST2Q9Y278 367 aa21.17■□□□□ 0.98
VPS28-206ENST00000526734 CXorf51AA0A1B0GTR3 108 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 TCRBV5S1A1TA0A578 114 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 ILVBLA1L0T0 632 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 CDX4O14627 284 aaPredicted RBP21.16■□□□□ 0.98
VPS28-206ENST00000526734 C5AR1P21730 350 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 OR1E1P30953 314 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 CLCN6P51797 869 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 ZNF143P52747 638 aaPredicted RBP21.16■□□□□ 0.98
VPS28-206ENST00000526734 C15orf59Q2T9L4 293 aaPredicted RBP21.16■□□□□ 0.98
VPS28-206ENST00000526734 PPM1JQ5JR12 505 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 WDR59Q6PJI9 974 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 LUZP1Q86V48 1076 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 MCOLN2Q8IZK6 566 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 OR52K2Q8NGK3 314 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 FRS2Q8WU20 508 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 FAM172AQ8WUF8 416 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 CCDC114Q96M63 670 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 NAP1L5Q96NT1 182 aaPredicted RBP21.16■□□□□ 0.98
VPS28-206ENST00000526734 TTYH3Q9C0H2 523 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 ADAMTS1Q9UHI8 967 aa21.16■□□□□ 0.98
VPS28-206ENST00000526734 DCHS1Q96JQ0 3298 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 ARHGAP33O14559 1287 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 SRGAP2O75044 1071 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 ACSL1P33121 698 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 AIF1P55008 147 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 HDAC4P56524 1084 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 FANCCQ00597 558 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 SCAPQ12770 1279 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 MANEALQ5VSG8 457 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 FAM46CQ5VWP2 391 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 PHLDB2Q86SQ0 1253 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 MMAAQ8IVH4 418 aaKnown RBP21.15■□□□□ 0.98
VPS28-206ENST00000526734 SH2D3CQ8N5H7 860 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 GANCQ8TET4 914 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 OR8D1Q8WZ84 308 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 FAM129BQ96TA1 746 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 CNPY3Q9BT09 278 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 OSGEPQ9NPF4 335 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 TMPRSS4Q9NRS4 437 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 FBXL12Q9NXK8 326 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 MPP6Q9NZW5 540 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 OR12D3Q9UGF7 316 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.15■□□□□ 0.98
VPS28-206ENST00000526734 SNX10Q9Y5X0 201 aa21.15■□□□□ 0.98
VPS28-206ENST00000526734 A0A1W2PQJ5 194 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 MED19A0JLT2 244 aaPredicted RBP21.14■□□□□ 0.97
VPS28-206ENST00000526734 GZMAP12544 262 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 SLC8A1P32418 973 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 MAPKAPK2P49137 400 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 KLHL30Q0D2K2 578 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 ZSCAN23Q3MJ62 389 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 ACCSLQ4AC99 568 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 PPP1R15BQ5SWA1 713 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 RETSATQ6NUM9 610 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 DCUN1D2Q6PH85 259 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 TFAP2DQ7Z6R9 452 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 STK40Q8N2I9 435 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 MCEEQ96PE7 176 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 PSMB7Q99436 277 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 OMDQ99983 421 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 PARVAQ9NVD7 372 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 ZNF212Q9UDV6 495 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 VPS51Q9UID3 782 aa21.14■□□□□ 0.97
VPS28-206ENST00000526734 FARP1Q9Y4F1 1045 aaPredicted RBP21.14■□□□□ 0.97
VPS28-206ENST00000526734 LRRC72A6NJI9 287 aa21.13■□□□□ 0.97
VPS28-206ENST00000526734 UPK3BL1B0FP48 263 aa21.13■□□□□ 0.97
VPS28-206ENST00000526734 UPK3BL2E5RIL1 263 aa21.13■□□□□ 0.97
VPS28-206ENST00000526734 C1QTNF3-AMACRE9PGA6 284 aa21.13■□□□□ 0.97
VPS28-206ENST00000526734 MID1O15344 667 aa21.13■□□□□ 0.97
VPS28-206ENST00000526734 BCAT2O15382 392 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms