RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 MCOLN2Q8IZK6 566 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 STK40Q8N2I9 435 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 CADM4Q8NFZ8 388 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 FAM172AQ8WUF8 416 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 PPP1R9BQ96SB3 815 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 FAM129BQ96TA1 746 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 NUSAP1Q9BXS6 441 aaKnown RBP17.47■□□□□ 0.39
CCS-203ENST00000526058 HAUS4Q9H6D7 363 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 AIPL1Q9NZN9 384 aa17.47■□□□□ 0.39
CCS-203ENST00000526058 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 A0A0D9SEW6 157 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 MEI4A8MW99 385 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 RHOCP08134 193 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 ENGP17813 658 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 RRM1P23921 792 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 HOXD12P35452 270 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 NNMTP40261 264 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 SKOR2Q2VWA4 1001 aaPredicted RBP17.46■□□□□ 0.39
CCS-203ENST00000526058 WDR45BQ5MNZ6 344 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 SYCP2LQ5T4T6 812 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 ACBD5Q5T8D3 534 aaPredicted RBP17.46■□□□□ 0.39
CCS-203ENST00000526058 DCAF12L1Q5VU92 463 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 DNAJC24Q6P3W2 148 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 STRADAQ7RTN6 431 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 ZNF571Q7Z3V5 609 aaPredicted RBP17.46■□□□□ 0.39
CCS-203ENST00000526058 MMAAQ8IVH4 418 aaKnown RBP17.46■□□□□ 0.39
CCS-203ENST00000526058 CCDC185Q8N715 623 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 CEP76Q8TAP6 659 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 FRS2Q8WU20 508 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 MCEEQ96PE7 176 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 PSMB7Q99436 277 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 PABPC3Q9H361 631 aaKnown RBP17.46■□□□□ 0.39
CCS-203ENST00000526058 C6orf106Q9H6K1 298 aaPredicted RBP17.46■□□□□ 0.39
CCS-203ENST00000526058 CAPN10Q9HC96 672 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 TMEM9BQ9NQ34 198 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 ZNF212Q9UDV6 495 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 SERGEFQ9UGK8 458 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 SLC25A13Q9UJS0 675 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 SLC6A14Q9UN76 642 aa17.46■□□□□ 0.39
CCS-203ENST00000526058 KNL1Q8NG31 2342 aa17.46■□□□□ 0.38
CCS-203ENST00000526058 METTL12A8MUP2 240 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 FAM72CH0Y354 149 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 GOLGA6L19H0YKK7 550 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 MID1O15344 667 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 CCP110O43303 1012 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 SNAP91O60641 907 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 RNASEH1O60930 286 aaKnown RBP17.45■□□□□ 0.38
CCS-203ENST00000526058 MT-CO1P00395 513 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 SERPINF2P08697 491 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 SKILP12757 684 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 OR1E1P30953 314 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 PBX1P40424 430 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 MAPK8P45983 427 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 UBASH3AP57075 661 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 CST6Q15828 149 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 ARL13BQ3SXY8 428 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 TTC31Q49AM3 519 aaPredicted RBP17.45■□□□□ 0.38
CCS-203ENST00000526058 PPP1R15BQ5SWA1 713 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 FAM72AQ5TYM5 149 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 FAM72DQ6L9T8 149 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 SETD3Q86TU7 594 aaPredicted RBP17.45■□□□□ 0.38
CCS-203ENST00000526058 FAM72BQ86X60 149 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 GANCQ8TET4 914 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 DNASE2BQ8WZ79 361 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 EDEM3Q9BZQ6 932 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 ZYG11BQ9C0D3 744 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 BTBD1Q9H0C5 482 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 FBXL12Q9NXK8 326 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 OR12D3Q9UGF7 316 aa17.45■□□□□ 0.38
CCS-203ENST00000526058 ATP9BO43861 1147 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 PRKCIP41743 596 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 PSMD8P48556 350 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 VASPP50552 380 aaPredicted RBP17.44■□□□□ 0.38
CCS-203ENST00000526058 ZNF143P52747 638 aaPredicted RBP17.44■□□□□ 0.38
CCS-203ENST00000526058 FOXK2Q01167 660 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 GFPT1Q06210 699 aaPredicted RBP17.44■□□□□ 0.38
CCS-203ENST00000526058 DLG2Q15700 870 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 ACCSLQ4AC99 568 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 FIGNQ5HY92 759 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 C6orf118Q5T5N4 469 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 MANEALQ5VSG8 457 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 SH2D3CQ8N5H7 860 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 OR7D4Q8NG98 312 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 MIR1-1HGQ9H1L0 117 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 OSBPL2Q9H1P3 480 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 PPARGC1AQ9UBK2 798 aaKnown RBP17.44■□□□□ 0.38
CCS-203ENST00000526058 EIF2B4Q9UI10 523 aaKnown RBP17.44■□□□□ 0.38
CCS-203ENST00000526058 VPS51Q9UID3 782 aa17.44■□□□□ 0.38
CCS-203ENST00000526058 CHD5Q8TDI0 1954 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 A0A1W2PP55 124 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 DDX3XO00571 662 aaKnown RBP eCLIP17.43■□□□□ 0.382e-13■■■■□ 25.1
CCS-203ENST00000526058 ATMINO43313 823 aaPredicted RBP17.43■□□□□ 0.38
CCS-203ENST00000526058 SEMA4FO95754 770 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 SRCP12931 536 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 GLDCP23378 1020 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 SLC8A1P32418 973 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 KRT83P78385 493 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 OGDHQ02218 1023 aa17.43■□□□□ 0.38
CCS-203ENST00000526058 NRG1Q02297 640 aaPredicted RBP17.43■□□□□ 0.38
CCS-203ENST00000526058 KLHL30Q0D2K2 578 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms