RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 SHMT1P34896 483 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 QARSP47897 775 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 HNRNPFP52597 415 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 BCAR1P56945 870 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CTBSQ01459 385 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 RHDQ02161 417 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 GABPAQ06546 454 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 DNASE1L3Q13609 305 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CARTPTQ16568 116 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 PPM1JQ5JR12 505 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 GLRA4Q5JXX5 417 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 TBCELQ5QJ74 424 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 STXBP5Q5T5C0 1151 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 TMEM198Q66K66 360 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CHSY3Q70JA7 882 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 C14orf80Q86SX3 495 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 AKAP14Q86UN6 197 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ZCCHC7Q8N3Z6 543 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MAPK15Q8TD08 544 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CLIP3Q96DZ5 547 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SCYL1Q96KG9 808 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MFSD14AQ96MC6 490 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CTRCQ99895 268 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 WDR12Q9GZL7 423 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 DHX35Q9H5Z1 703 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SPC25Q9HBM1 224 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SMOXQ9NWM0 555 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 NXF1Q9UBU9 619 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 KLHL3Q9UH77 587 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MID2Q9UJV3 735 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 VPS28Q9UK41 221 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 EMCNQ9ULC0 261 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 PCDHGC3Q9UN70 934 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SATB2Q9UPW6 733 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 PRELID1Q9Y255 219 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 FIS1Q9Y3D6 152 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 LTBP4Q8N2S1 1624 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 COL4A1P02462 1669 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 DDX60LQ5H9U9 1706 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ANKRD34BA5PLL1 514 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ZBBXA8MT70 800 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SOCS2O14508 198 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 DYNC1LI2O43237 492 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ASNA1O43681 348 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MAN1A2O60476 641 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 LSM8O95777 96 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ALDOAP04075 364 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ENO2P09104 434 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 HSPA1AP0DMV8 641 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 HSPA1BP0DMV9 641 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 IL10P22301 178 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 IL1R2P27930 398 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SLC7A1P30825 629 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 HPCAL1P37235 193 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ARL1P40616 181 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 GRIA3P42263 894 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 YAP1P46937 504 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 NPTX2P47972 431 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ACOT2P49753 483 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CSE1LP55060 971 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SESN2P58004 480 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MERTKQ12866 999 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SLC10A2Q12908 348 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MMRN1Q13201 1228 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 OXA1LQ15070 435 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 NOMO1Q15155 1222 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 RC3H1Q5TC82 1133 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SCYL2Q6P3W7 929 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 KCNT2Q6UVM3 1135 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 TIFABQ6ZNK6 161 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 VASH1Q7L8A9 365 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CHST15Q7LFX5 561 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 DHFR2Q86XF0 187 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MAP4K3Q8IVH8 894 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 CCDC60Q8IWA6 550 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 DHRSXQ8N5I4 330 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MINDY2Q8NBR6 621 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 RAB2BQ8WUD1 216 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 TFAP2CQ92754 450 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ALPK1Q96QP1 1244 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ZNF347Q96SE7 839 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SH3GL1Q99961 368 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 MROQ9BYG7 248 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 TRIM15Q9C019 465 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 VPS33BQ9H267 617 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 FANCEQ9HB96 536 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 RIC8BQ9NVN3 520 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 PCDHA11Q9Y5I1 949 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SNX9Q9Y5X1 595 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ZNFX1Q9P2E3 1918 aaKnown RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 WDR27A2RRH5 827 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 HMX2A2RU54 273 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 TAF4O00268 1085 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 ACOT8O14734 319 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 PAPSS1O43252 624 aaPredicted RBP4.79□□□□□ -1.64
HIPK3-204ENST00000525975 PRPSAP2O60256 369 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 TADA2AO75478 443 aa4.79□□□□□ -1.64
HIPK3-204ENST00000525975 SRP72O76094 671 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms