RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FEM1AQ9BSK4 669 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 SNRNP25Q9BV90 132 aaKnown RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ADAM33Q9BZ11 813 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TPSD1Q9BZJ3 242 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TRIM7Q9C029 511 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAGEH1Q9H213 219 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 EPC1Q9H2F5 836 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRDM16Q9HAZ2 1276 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ANLNQ9NQW6 1124 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMPRSS4Q9NRS4 437 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMEM248Q9NWD8 314 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 GPATCH2LQ9NWQ4 482 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 C2orf42Q9NWW7 574 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ERVW-1Q9UQF0 538 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 NCKAP1Q9Y2A7 1128 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 RAD54BQ9Y620 910 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 A0A0C4DFX4 3053 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIAA1549LQ6ZVL6 1849 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 CXorf51AA0A1B0GTR3 108 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 A0A1W2PQF6 199 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 TARSL2A2RTX5 802 aaKnown RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARHGAP42A6NI28 874 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 WASH3PC4AMC7 463 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 C1QTNF3-AMACRE9PGA6 284 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM72CH0Y354 149 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 I6L893 689 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SPOPO43791 374 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 BNIP3LO60238 219 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 GFRA3O60609 400 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 LILRB5O75023 590 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 NDUFA10O95299 355 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ADH1BP00325 375 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 HLA-EP13747 358 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 GABRG2P18507 467 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 NDUFV2P19404 249 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 OXTRP30559 389 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 HOXC13P31276 330 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SERPINB6P35237 376 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 DPP6P42658 865 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC1A1P43005 524 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 STK19P49842 368 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 IRAK1P51617 712 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 NDST2P52849 883 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 NAP1L1P55209 391 aaKnown RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 YBEYP58557 167 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC20A2Q08357 652 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF252P-AS1Q0IIN9 211 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC15Q0P6D6 951 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 CAMK2GQ13555 558 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ENPP2Q13822 863 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ELAVL3Q14576 367 aaKnown RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 MESDQ14696 234 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 IFI16Q16666 785 aaKnown RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 PTPRNQ16849 979 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SMTNL2Q2TAL5 461 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ASTE1Q2TB18 679 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 HNRNPA1L2Q32P51 320 aaKnown RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 RAB6CQ53S08 254 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM72AQ5TYM5 149 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 MANEALQ5VSG8 457 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM46CQ5VWP2 391 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM72DQ6L9T8 149 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIAA1211LQ6NV74 962 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMCO3Q6UWJ1 677 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 RFX8Q6ZV50 586 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM72BQ86X60 149 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 CACUL1Q86Y37 369 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMPRSS6Q8IU80 811 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF683Q8IZ20 524 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 PYROXD2Q8N2H3 581 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 LZTR1Q8N653 840 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF366Q8N895 744 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 KCTD6Q8NC69 237 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC112Q8NEF3 446 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 OR7D4Q8NG98 312 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC35G2Q8TBE7 412 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 NSMCE1Q8WV22 266 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 OR8D1Q8WZ84 308 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 RUBCNQ92622 972 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 NELL1Q92832 810 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ERLEC1Q96DZ1 483 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 P2RY11Q96G91 374 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 BTBD6Q96KE9 485 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 LMLNQ96KR4 655 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 RPL10LQ96L21 214 aaKnown RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 MRGPRX1Q96LB2 322 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF830Q96NB3 372 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 CALN1Q9BXU9 219 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 PACSIN1Q9BY11 444 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 CEP44Q9C0F1 390 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 RAB6CQ9H0N0 254 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMEM245Q9H330 911 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 SP110Q9HB58 689 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 DYRK4Q9NR20 520 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 HAUS2Q9NVX0 235 aa5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 POLR3BQ9NW08 1133 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 RCOR3Q9P2K3 495 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P40-201ENST00000525121 DNAI1Q9UI46 699 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms