RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	ZNF529	Q6P280	563 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356		Q6ZTC4	211 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	TMTC3	Q6ZXV5	915 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	USP49	Q70CQ1	688 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	UNC13D	Q70J99	1090 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	UBE2Q1	Q7Z7E8	422 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	IQCA1	Q86XH1	822 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	CEP57L1	Q8IYX8	460 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	ARL6IP6	Q8N6S5	226 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	OR8H1	Q8NGG4	311 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	CEP70	Q8NHQ1	597 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	SCAMP5	Q8TAC9	235 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	KCNG4	Q8TDN1	519 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	CSGALNACT1	Q8TDX6	532 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	TBC1D22A	Q8WUA7	517 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	TMEM125	Q96AQ2	219 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	PGBD1	Q96JS3	809 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	PRPF18	Q99633	342 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	C7orf25	Q9BPX7	421 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	DPH1	Q9BZG8	443 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	ABCG4	Q9H172	646 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	SIL1	Q9H173	461 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	PABPC3	Q9H361	631 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	ZWILCH	Q9H900	591 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	SEPSECS	Q9HD40	501 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	SARS2	Q9NP81	518 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	PRDM8	Q9NQV8	689 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	CNNM1	Q9NRU3	951 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	TMOD4	Q9NZQ9	345 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	HERC5	Q9UII4	1024 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	RPS6KA6	Q9UK32	745 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	TBX20	Q9UMR3	447 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	SNX8	Q9Y5X2	465 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	SLIT3	O75094	1523 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	BTAF1	O14981	1849 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356	CCDC7	Q96M83	1385 aa		4.65	□□□□□ -1.67
PCM1-223	ENST00000524356		A0A1W2PS29	197 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	MYMK	A6NI61	221 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	AGAP14	A8MT82	685 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	FAM171A2	A8MVW0	826 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	RTCA	O00442	366 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	AP3D1	O14617	1153 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	SLC7A4	O43246	635 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	PHF2	O75151	1096 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ACTL6B	O94805	426 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	TGDS	O95455	350 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	SCGB1D1	O95968	90 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	AHSG	P02765	367 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ACADM	P11310	421 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ATP6V1B1	P15313	513 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	MAL	P21145	153 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	DRD4	P21917	467 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ADSL	P30566	484 aa	Predicted RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ACSL1	P33121	698 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	MLH1	P40692	756 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	NLRP5	P59047	1200 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	TLE1	Q04724	770 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ITPK1	Q13572	414 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	EIF4A2	Q14240	407 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	WTAP	Q15007	396 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	TTC31	Q49AM3	519 aa	Predicted RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	CCDC158	Q5M9N0	1113 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	NFRKB	Q6P4R8	1299 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	BRSK2	Q8IWQ3	736 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	MSANTD4	Q8NCY6	345 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	BRIX1	Q8TDN6	353 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	KBTBD7	Q8WVZ9	684 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ATP2A3	Q93084	1043 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	CNDP2	Q96KP4	475 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ITPA	Q9BY32	194 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	PRSS22	Q9GZN4	317 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	ACAD9	Q9H845	621 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	GRPEL1	Q9HAV7	217 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	BCO1	Q9HAY6	547 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	RBM12	Q9NTZ6	932 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	TDP1	Q9NUW8	608 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	INTS13	Q9NVM9	706 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	MTRR	Q9UBK8	725 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	TUBGCP6	Q96RT7	1819 aa		4.64	□□□□□ -1.67
PCM1-223	ENST00000524356	KCNU1	A8MYU2	1149 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	NT5C1B-RDH14	C9J2C7	533 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356		H0Y3Z8	333 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	CLGN	O14967	610 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	HTATSF1	O43719	755 aa	Known RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	ERAL1	O75616	437 aa	Known RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	MMP10	P09238	476 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	HDC	P19113	662 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	SOX8	P57073	446 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	CREB5	Q02930	508 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	TBCE	Q15813	527 aa	Predicted RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	H1FNT	Q75WM6	255 aa	Predicted RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	RNF44	Q7L0R7	432 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	CATSPER4	Q7RTX7	472 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	UBE3B	Q7Z3V4	1068 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	SZRD1	Q7Z422	152 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms