RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	UCMA	Q8WVF2	138 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	SDCCAG3	Q96C92	435 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	RITA1	Q96K30	269 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	C7orf26	Q96N11	449 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	TTC14	Q96N46	770 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	AGXT2	Q9BYV1	514 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	LMAN2L	Q9H0V9	348 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	PABPC3	Q9H361	631 aa	Known RBP	5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	GBA2	Q9HCG7	927 aa	Predicted RBP	5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	PREB	Q9HCU5	417 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	ANKEF1	Q9NU02	776 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	TBC1D23	Q9NUY8	699 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	NSMCE4A	Q9NXX6	385 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	NKIRAS2	Q9NYR9	191 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	SHOC2	Q9UQ13	582 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	SBF1	O95248	1867 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	FSD2	A1L4K1	749 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	HMX3	A6NHT5	357 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	MYO1C	O00159	1063 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ACTL6B	O94805	426 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ONECUT2	O95948	504 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	NPS	P0C0P6	89 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	IDE	P14735	1019 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	EGR1	P18146	543 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	BTF3	P20290	206 aa	Known RBP	5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	HOXD12	P35452	270 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	PDE6C	P51160	858 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	DGKE	P52429	567 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	E2F1	Q01094	437 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	CHRND	Q07001	517 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	CUL4B	Q13620	913 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	DLGAP5	Q15398	846 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	MEA1	Q16626	185 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	TRIM71	Q2Q1W2	868 aa	Known RBP	5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	PLA1A	Q53H76	456 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	LCE1A	Q5T7P2	110 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ARMC3	Q5W041	872 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ZDHHC24	Q6UX98	284 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	TRIM72	Q6ZMU5	477 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	CAND1	Q86VP6	1230 aa	Known RBP	5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	CNGA4	Q8IV77	575 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	YAF2	Q8IY57	180 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ABRA	Q8N0Z2	381 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	CNTROB	Q8N137	903 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ANKRD52	Q8NB46	1076 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ZMIZ2	Q8NF64	920 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	BPIFB1	Q8TDL5	484 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	OSCP1	Q8WVF1	389 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	PPP2R3C	Q969Q6	453 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ZBTB9	Q96C00	473 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	TWSG1	Q9GZX9	223 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	PRDM8	Q9NQV8	689 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	KLHL13	Q9P2N7	655 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	CAPN11	Q9UMQ6	739 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	GPR34	Q9UPC5	381 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	SH2B3	Q9UQQ2	575 aa		5.17	□□□□□ -1.58
SREK1-213	ENST00000523655	ANKAR	Q7Z5J8	1434 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	PIK3C2A	O00443	1686 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655		A0A1W2PPH5	198 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	PGPEP1L	A6NFU8	196 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	USO1	O60763	962 aa	Known RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	ZBED4	O75132	1171 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	DDN	O94850	711 aa	Predicted RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	TK1	P04183	234 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	TERF1	P54274	439 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	PRKAA2	P54646	552 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	TPTE	P56180	551 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	ACTR2	P61160	394 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	PSG6	Q00889	435 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	CCNG2	Q16589	344 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	RNASE12	Q5GAN4	147 aa	Known RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	TMTC4	Q5T4D3	741 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	DCAF12L1	Q5VU92	463 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	FAM205BP	Q63HN1	556 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	KIRREL2	Q6UWL6	708 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	BBS12	Q6ZW61	710 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	ZNF804A	Q7Z570	1209 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	KCTD20	Q7Z5Y7	419 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	CTU1	Q7Z7A3	348 aa	Known RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	SLC44A2	Q8IWA5	706 aa	Predicted RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	IZUMO1	Q8IYV9	350 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	NKAIN3	Q8N8D7	197 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655		Q8N9P0	234 aa	Predicted RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	AFG1L	Q8WV93	481 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	SOCS4	Q8WXH5	440 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	RPL36AL	Q969Q0	106 aa	Known RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	HVCN1	Q96D96	273 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	ZNF48	Q96MX3	618 aa	Predicted RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	MOGAT1	Q96PD6	335 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	PRR25	Q96S07	402 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	C17orf80	Q9BSJ5	609 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	THAP7	Q9BT49	309 aa	Predicted RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	CIPC	Q9C0C6	399 aa		5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	TP63	Q9H3D4	680 aa	Predicted RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	SEPSECS	Q9HD40	501 aa	Known RBP	5.16	□□□□□ -1.58
SREK1-213	ENST00000523655	NRIP3	Q9NQ35	241 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms