RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TRIM69Q86WT6 500 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 ZNF843Q8N446 348 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 LMO3Q8TAP4 145 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 BTN2A3PQ96KV6 586 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 TJP2Q9UDY2 1190 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 ATMQ13315 3056 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 TRIM38O00635 465 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 SART1O43290 800 aaKnown RBP23.43■■□□□ 1.34
PVT1-218ENST00000523328 SIGLEC6O43699 453 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 IGLV3-25P01717 112 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 PLA2G2AP14555 144 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 PDGFRAP16234 1089 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 ACTN2P35609 894 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 PLK1P53350 603 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 SULT2A1Q06520 285 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 EIF4EBP2Q13542 120 aaPredicted RBP23.43■■□□□ 1.34
PVT1-218ENST00000523328 AGBL4Q5VU57 503 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 CIR1Q86X95 450 aaPredicted RBP23.43■■□□□ 1.34
PVT1-218ENST00000523328 SPACA3Q8IXA5 215 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 CCAR2Q8N163 923 aaKnown RBP23.43■■□□□ 1.34
PVT1-218ENST00000523328 COL26A1Q96A83 441 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 PRMT1Q99873 361 aaKnown RBP23.43■■□□□ 1.34
PVT1-218ENST00000523328 ST7Q9NRC1 585 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 RMND1Q9NWS8 449 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 CA5BQ9Y2D0 317 aa23.43■■□□□ 1.34
PVT1-218ENST00000523328 VASPP50552 380 aaPredicted RBP23.42■■□□□ 1.34
PVT1-218ENST00000523328 PITX1P78337 314 aaPredicted RBP23.42■■□□□ 1.34
PVT1-218ENST00000523328 LRRC63Q05C16 580 aa23.42■■□□□ 1.34
PVT1-218ENST00000523328 CCDC173Q0VFZ6 552 aa23.42■■□□□ 1.34
PVT1-218ENST00000523328 CNTN1Q12860 1018 aa23.42■■□□□ 1.34
PVT1-218ENST00000523328 STAT4Q14765 748 aa23.42■■□□□ 1.34
PVT1-218ENST00000523328 SLC25A45Q8N413 288 aa23.42■■□□□ 1.34
PVT1-218ENST00000523328 F5H5T6 163 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 CAPN9O14815 690 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 TRUB2O95900 331 aaKnown RBP23.41■■□□□ 1.34
PVT1-218ENST00000523328 MT-CO3P00414 261 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 NUCB2P80303 420 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 E2F1Q01094 437 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 ZNF211Q13398 564 aaPredicted RBP23.41■■□□□ 1.34
PVT1-218ENST00000523328 CXorf57Q6NSI4 855 aaKnown RBP23.41■■□□□ 1.34
PVT1-218ENST00000523328 KDM7AQ6ZMT4 941 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 RRAGAQ7L523 313 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 DSG4Q86SJ6 1040 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 OR8D1Q8WZ84 308 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 ALG14Q96F25 216 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 SCAND2PQ9GZW5 306 aaPredicted RBP23.41■■□□□ 1.34
PVT1-218ENST00000523328 METTL14Q9HCE5 456 aaKnown RBP23.41■■□□□ 1.34
PVT1-218ENST00000523328 PPM1HQ9ULR3 514 aa23.41■■□□□ 1.34
PVT1-218ENST00000523328 COL6A6A6NMZ7 2263 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 KCNU1A8MYU2 1149 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 PRAMEF26H0Y7S4 382 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 ATP9BO43861 1147 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 ACADSBP45954 432 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 GCNT1Q02742 428 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 SETMARQ53H47 684 aaPredicted RBP23.4■■□□□ 1.34
PVT1-218ENST00000523328 FAM46CQ5VWP2 391 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 ZNF605Q86T29 641 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 ARHGEF19Q8IW93 802 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 TMEM145Q8NBT3 493 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 CCDC34Q96HJ3 373 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 GSDMAQ96QA5 445 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 TRIM62Q9BVG3 475 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 SLC4A5Q9BY07 1137 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 POPDC2Q9HBU9 364 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 PCDHB1Q9Y5F3 818 aa23.4■■□□□ 1.34
PVT1-218ENST00000523328 A0A1B0GVM2 712 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 TCAF2A6NFQ2 919 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 TAS2R38P59533 333 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 CXADRP78310 365 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 POM121L1PQ3SYA9 428 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 DENND1BQ6P3S1 775 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 ATP6V0D2Q8N8Y2 350 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 OR52K2Q8NGK3 314 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 OR4C6Q8NH72 309 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 STK32AQ8WU08 396 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 KLHDC7BQ96G42 594 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.39■■□□□ 1.33
PVT1-218ENST00000523328 UCKL1Q9NWZ5 548 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 CNTN6Q9UQ52 1028 aa23.39■■□□□ 1.33
PVT1-218ENST00000523328 E5RJQ4 531 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 MCF2LO15068 1137 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 ALOX15BO15296 676 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 DGKAP23743 735 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 YWHAZP63104 245 aaKnown RBP23.38■■□□□ 1.33
PVT1-218ENST00000523328 TTC39BQ5VTQ0 682 aaPredicted RBP23.38■■□□□ 1.33
PVT1-218ENST00000523328 SPATA20Q8TB22 786 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 ERCC4Q92889 916 aaPredicted RBP23.38■■□□□ 1.33
PVT1-218ENST00000523328 KREMEN1Q96MU8 473 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 PREBQ9HCU5 417 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 TENM4Q6N022 2769 aa23.38■■□□□ 1.33
PVT1-218ENST00000523328 C1QTNF3-AMACRE9PGA6 284 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 P4HA2O15460 535 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 RNGTTO60942 597 aaKnown RBP23.37■■□□□ 1.33
PVT1-218ENST00000523328 GIMD1P0DJR0 217 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 OXCT1P55809 520 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 DAB2P98082 770 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 CENPCQ03188 943 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 CFHR1Q03591 330 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 KCNH2Q12809 1159 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 DLG2Q15700 870 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms