RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 GNA14O95837 355 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 ADH1BP00325 375 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 C5AR1P21730 350 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 NNMTP40261 264 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 SFSWAPQ12872 951 aaKnown RBP15.89■□□□□ 0.13
MRPS28-209ENST00000522987 CAMK4Q16566 473 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 INAVAQ3KP66 663 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 RABGAP1LQ5R372 815 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 TRIM65Q6PJ69 517 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 Q6ZVU0 165 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 C14orf80Q86SX3 495 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 GALNT15Q8N3T1 639 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 PPP1R13BQ96KQ4 1090 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 MED15Q96RN5 788 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 SIK2Q9H0K1 926 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 GDF3Q9NR23 364 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.89■□□□□ 0.13
MRPS28-209ENST00000522987 SLC12A6Q9UHW9 1150 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 TRPM6Q9BX84 2022 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 A0A1B0GVM2 712 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 TCAF2A6NFQ2 919 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 SDC3O75056 442 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 ERBB2P04626 1255 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 CCR5P51681 352 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 MARSP56192 900 aaKnown RBP15.88■□□□□ 0.13
MRPS28-209ENST00000522987 CAMK2BQ13554 666 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 ELAVL3Q14576 367 aaKnown RBP15.88■□□□□ 0.13
MRPS28-209ENST00000522987 ARID5BQ14865 1188 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 KDM1BQ8NB78 822 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 STK32AQ8WU08 396 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 FRS2Q8WU20 508 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 TRIM62Q9BVG3 475 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 SLC25A13Q9UJS0 675 aa15.88■□□□□ 0.13
MRPS28-209ENST00000522987 TLR4O00206 839 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 ZNF18P17022 549 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 TFE3P19532 575 aaPredicted RBP15.87■□□□□ 0.13
MRPS28-209ENST00000522987 EPHA8P29322 1005 aaPredicted RBP15.87■□□□□ 0.13
MRPS28-209ENST00000522987 CCR1P32246 355 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 NXPH1P58417 271 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
MRPS28-209ENST00000522987 CNTN1Q12860 1018 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 AUHQ13825 339 aaKnown RBP15.87■□□□□ 0.13
MRPS28-209ENST00000522987 SMAD1Q15797 465 aaKnown RBP15.87■□□□□ 0.13
MRPS28-209ENST00000522987 BEND5Q7L4P6 421 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 SPATS2Q86XZ4 545 aaKnown RBP15.87■□□□□ 0.13
MRPS28-209ENST00000522987 SAP25Q8TEE9 199 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 OR8D1Q8WZ84 308 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 SKA1Q96BD8 255 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 ALG14Q96F25 216 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 SLC2A13Q96QE2 648 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 SPAG5Q96R06 1193 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 TMPRSS4Q9NRS4 437 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 VPS28Q9UK41 221 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 HS3ST4Q9Y661 456 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 ASXL3Q9C0F0 2248 aa15.87■□□□□ 0.13
MRPS28-209ENST00000522987 FASNP49327 2511 aaKnown RBP15.87■□□□□ 0.13
MRPS28-209ENST00000522987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.86■□□□□ 0.13
MRPS28-209ENST00000522987 M0QYT0 321 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 DFNA5O60443 496 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 SNAP91O60641 907 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 PAGE1O75459 146 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 CNTN5O94779 1100 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 JUPP14923 745 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 PRLRP16471 622 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 ZNF177Q13360 481 aaPredicted RBP15.86■□□□□ 0.13
MRPS28-209ENST00000522987 EIF4EBP2Q13542 120 aaPredicted RBP15.86■□□□□ 0.13
MRPS28-209ENST00000522987 DLG2Q15700 870 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 PTPN20Q4JDL3 420 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 SOWAHCQ53LP3 525 aaPredicted RBP15.86■□□□□ 0.13
MRPS28-209ENST00000522987 HSP90AA4PQ58FG1 418 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 EFHC1Q5JVL4 640 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 NAPEPLDQ6IQ20 393 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 GBP6Q6ZN66 633 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 PRPF39Q86UA1 669 aaKnown RBP15.86■□□□□ 0.13
MRPS28-209ENST00000522987 ELOA2Q8IYF1 753 aaPredicted RBP15.86■□□□□ 0.13
MRPS28-209ENST00000522987 PIP4K2CQ8TBX8 421 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 FEM1AQ9BSK4 669 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 MUC3BQ9H195 1237 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 SYNCQ9H7C4 482 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 FZD3Q9NPG1 666 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 ANLNQ9NQW6 1124 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 APEX2Q9UBZ4 518 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 CELSR3Q9NYQ7 3312 aa15.86■□□□□ 0.13
MRPS28-209ENST00000522987 IGSF10Q6WRI0 2623 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 K7ERQ8 282 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 RNF103O00237 685 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 HSF2BPO75031 334 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 RFPL3O75679 317 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 ADCY5O95622 1261 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
MRPS28-209ENST00000522987 MT-CO1P00395 513 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 SLC2A3P11169 496 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 PON1P27169 355 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 MTIF2P46199 727 aaKnown RBP15.85■□□□□ 0.13
MRPS28-209ENST00000522987 ARRB1P49407 418 aaPredicted RBP15.85■□□□□ 0.13
MRPS28-209ENST00000522987 SEMG2Q02383 582 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 SULT2A1Q06520 285 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 SLC12A1Q13621 1099 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 EXOC3L4Q17RC7 722 aa15.85■□□□□ 0.13
MRPS28-209ENST00000522987 ALFQ53S48 1182 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms