RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LBHD1Q9BQE6 289 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SH2D3AQ9BRG2 576 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 HTATIP2Q9BUP3 242 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 QTRT1Q9BXR0 403 aaKnown RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 CLPBQ9H078 707 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 BRF2Q9HAW0 419 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 PKP3Q9Y446 797 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SPATA31A5Q5VU36 1347 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SPATA31A7Q8IWB4 1347 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 H7C1Q1 480 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 EXOC3O60645 756 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 CNTN5O94779 1100 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 PGM1P36871 562 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 GPD2P43304 727 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 CCR9P51686 369 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 TUBA4AP68366 448 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 KRTAP1-1Q07627 177 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 HNRNPA0Q13151 305 aaKnown RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 CAMK1Q14012 370 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 GPR68Q15743 365 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 MEA1Q16626 185 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 SLC45A4Q5BKX6 768 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 CEP78Q5JTW2 689 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 KIAA1614Q5VZ46 1190 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 GJB7Q6PEY0 223 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZNF474Q6S9Z5 364 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 TRIM72Q6ZMU5 477 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 FASTKD5Q7L8L6 764 aaKnown RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 MDGA2Q7Z553 956 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 GALNT7Q86SF2 657 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 PNLDC1Q8NA58 520 aaKnown RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 NGDNQ8NEJ9 315 aaKnown RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 RFWD2Q8NHY2 731 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZCCHC10Q8TBK6 192 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 SNRNP27Q8WVK2 155 aaKnown RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 RSRC1Q96IZ7 334 aaKnown RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 HDHD5Q9BXW7 423 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 RNF7Q9UBF6 113 aa5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 SIRT4Q9Y6E7 314 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P1-201ENST00000522557 PI4KAP2A4QPH2 592 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 NPIPB15A6NHN6 443 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 K7ENM7 598 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 LDLRAD4O15165 306 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 TGFB1I1O43294 461 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 SGPL1O95470 568 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 SCGB1D1O95968 90 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 MT-CO3P00414 261 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 PRR35P0CG20 571 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 TM4SF1P30408 202 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 SLC8A1P32418 973 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 IDUAP35475 653 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 HNF1BP35680 557 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 GGT5P36269 586 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 GJC1P36383 396 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 ADPRHP54922 357 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 TMEM63BQ5T3F8 832 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 UBAP2Q5T6F2 1119 aaKnown RBP5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 CCDC30Q5VVM6 783 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 FAM205BPQ63HN1 556 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 NAPEPLDQ6IQ20 393 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 MTFR2Q6P444 385 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 R3HCC1LQ7Z5L2 792 aaKnown RBP5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 ANKRD44Q8N8A2 993 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 TERB1Q8NA31 727 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 C2CD4CQ8TF44 421 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZNF778Q96MU6 729 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 CTDSP1Q9GZU7 261 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 PLEKHA5Q9HAU0 1116 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 PPP1R14DQ9NXH3 145 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 CLIC5Q9NZA1 410 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 HCN3Q9P1Z3 774 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 TBC1D14Q9P2M4 693 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 ORC3Q9UBD5 711 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 KLQ9UEF7 1012 aa5.12□□□□□ -1.59
HMGB1P1-201ENST00000522557 TAF4O00268 1085 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 FYB1O15117 783 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 PTP4A3O75365 173 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 LAMP2P13473 410 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 MAPK4P31152 587 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZNF81P51508 661 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 SHC2P98077 582 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 KCTD2Q14681 263 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 GXYLT1Q4G148 440 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 MTX3Q5HYI7 312 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 SH2D4BQ5SQS7 431 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 MON1AQ86VX9 555 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZNF366Q8N895 744 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 OR52N4Q8NGI2 321 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZNF398Q8TD17 642 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 UCMAQ8WVF2 138 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 IGFBPL1Q8WX77 278 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 RAB40AQ8WXH6 277 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 STAMQ92783 540 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 SH3KBP1Q96B97 665 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 DAZAP1Q96EP5 407 aaKnown RBP5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 HIC2Q96JB3 615 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 RITA1Q96K30 269 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 GPR78Q96P69 363 aa5.11□□□□□ -1.59
HMGB1P1-201ENST00000522557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms