RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PRR23CQ6ZRP0 262 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CLEC17AQ6ZS10 378 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 FRMD5Q7Z6J6 570 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 FAM83AQ86UY5 434 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 HOOK3Q86VS8 718 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 TICAM1Q8IUC6 712 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 FAM20CQ8IXL6 584 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ARMC10Q8N2F6 343 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 PI4KAP1Q8N8J0 262 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ATAD1Q8NBU5 361 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 OR52K2Q8NGK3 314 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 FAM216AQ8WUB2 273 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ZNF75CPQ92670 426 aaPredicted RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 PEX11GQ96HA9 241 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 FAM111AQ96PZ2 611 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 PAFAH2Q99487 392 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 TXN2Q99757 166 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 VKORC1Q9BQB6 163 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 MGME1Q9BQP7 344 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 PAAF1Q9BRP4 392 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 TACO1Q9BSH4 297 aaKnown RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 TCHPQ9BT92 498 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.19□□□□□ -1.74
SKP1-209ENST00000522552 SLC25A23Q9BV35 468 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 WDR11Q9BZH6 1224 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CTDSP1Q9GZU7 261 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CLPBQ9H078 707 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 KCNF1Q9H3M0 494 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CARS2Q9HA77 564 aaKnown RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 FBRSL1Q9HCM7 1045 aaKnown RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 CNIH4Q9P003 139 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 INTS6Q9UL03 887 aaKnown RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 RPH3AQ9Y2J0 694 aaPredicted RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 GXYLT2A0PJZ3 443 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 IKBKBO14920 756 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 KIF5CO60282 957 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 HAUS5O94927 633 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 SLCO2B1O94956 709 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CHEK2O96017 543 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 GHRP10912 638 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 PEPDP12955 493 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 GYPEP15421 78 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 THBS4P35443 961 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ADCY8P40145 1251 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CAPZA1P52907 286 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 GMFBP60983 142 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 FAM189BP81408 668 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 EFNB1P98172 346 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 NIPAL4Q0D2K0 466 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 TRA2AQ13595 282 aaKnown RBP eCLIP4.19□□□□□ -1.74
SKP1-209ENST00000522552 FRG1Q14331 258 aaKnown RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 IQCB1Q15051 598 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 TRADDQ15628 312 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ASTE1Q2TB18 679 aaPredicted RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 LETM2Q2VYF4 491 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ZNF667Q5HYK9 610 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ADGRF1Q5T601 910 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 UTP14CQ5TAP6 766 aaKnown RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 GALNT18Q6P9A2 607 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 MTHFD1LQ6UB35 978 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ARHGAP27Q6ZUM4 889 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 MARK2Q7KZI7 788 aaKnown RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 RRM2BQ7LG56 351 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ZAR1Q86SH2 424 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 TMEM200AQ86VY9 491 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 SHISA5Q8N114 240 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 MB21D1Q8N884 522 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 SHCBP1Q8NEM2 672 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CADM4Q8NFZ8 388 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 DNAJB14Q8TBM8 379 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 PRCCQ92733 491 aaPredicted RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 PPP2R3CQ969Q6 453 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 PHACTR3Q96KR7 559 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 LINC00615Q96LM1 132 aaPredicted RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 SLC46A1Q96NT5 459 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 INTS14Q96SY0 518 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 MAP7D2Q96T17 732 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 GAD1Q99259 594 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 SH3GL2Q99962 352 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 ZNF341Q9BYN7 854 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 SIK2Q9H0K1 926 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 KCNH6Q9H252 994 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 RRP7BPQ9NSQ0 103 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 CYP39A1Q9NYL5 469 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 AMACRQ9UHK6 382 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 NUDT5Q9UKK9 219 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 RAB21Q9UL25 225 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 TRPC5Q9UL62 973 aaPredicted RBP4.19□□□□□ -1.74
SKP1-209ENST00000522552 PLAGL2Q9UPG8 496 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 SNX14Q9Y5W7 946 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 NFS1Q9Y697 457 aa4.19□□□□□ -1.74
SKP1-209ENST00000522552 PITPNM2Q9BZ72 1349 aa4.18□□□□□ -1.74
SKP1-209ENST00000522552 TCRBV21S2A2A0A5A6 115 aa4.18□□□□□ -1.74
SKP1-209ENST00000522552 SYCE3A1L190 88 aa4.18□□□□□ -1.74
SKP1-209ENST00000522552 ZC3H12DA2A288 527 aaKnown RBP4.18□□□□□ -1.74
SKP1-209ENST00000522552 HMX2A2RU54 273 aa4.18□□□□□ -1.74
SKP1-209ENST00000522552 SMIM30A4D0T7 59 aa4.18□□□□□ -1.74
SKP1-209ENST00000522552 ZSCAN5CA6NGD5 496 aaPredicted RBP4.18□□□□□ -1.74
SKP1-209ENST00000522552 MBD3L5A6NJ08 208 aaPredicted RBP4.18□□□□□ -1.74
SKP1-209ENST00000522552 FAM170BA6NMN3 283 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms