RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 FAM182AQ5T1J6 154 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 LRRC49Q8IUZ0 686 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 MFN1Q8IWA4 741 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 CCDC13Q8IYE1 715 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 ADGRG2Q8IZP9 1017 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 KIAA1958Q8N8K9 716 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 OR52K2Q8NGK3 314 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 OSCP1Q8WVF1 389 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 SUSD6Q92537 303 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 IRF7Q92985 503 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 E2F7Q96AV8 911 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 PNKPQ96T60 521 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 PARD6BQ9BYG5 372 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 UBE2ZQ9H832 354 aaPredicted RBP21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 SPHK2Q9NRA0 654 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 THG1LQ9NWX6 298 aaKnown RBP21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 TBC1D30Q9Y2I9 924 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 A0A0C4DFX4 3053 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 C2orf16Q68DN1 1984 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 ILVBLA1L0T0 632 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 STK10O94804 968 aaKnown RBP21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 CCNCP24863 283 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 HOXD9P28356 352 aaPredicted RBP21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 ACVRL1P37023 503 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 ADCY8P40145 1251 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 NUMBP49757 651 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 ANO4Q32M45 955 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 FYB2Q5VWT5 728 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 RNF219Q5W0B1 726 aaPredicted RBP21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 CXorf57Q6NSI4 855 aaKnown RBP21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 IFT20Q8IY31 132 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 ARHGEF2Q92974 986 aaKnown RBP21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 TSGA13Q96PP4 275 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 SPON2Q9BUD6 331 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 BBS2Q9BXC9 721 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 MAGEH1Q9H213 219 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 PCDH9Q9HC56 1237 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 IPO11Q9UI26 975 aaKnown RBP21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 SNX24Q9Y343 169 aa21.88■■□□□ 1.09
R3HCC1-208ENST00000522012 A0A0D9SEW6 157 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 GRXCR2A6NFK2 248 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 NEDD8-MDP1E9PL57 170 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 KCNK1O00180 336 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 MAFKO60675 156 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 SP100P23497 879 aaPredicted RBP21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 ACTN2P35609 894 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 FSCBQ5H9T9 825 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 LY6G5CQ5SRR4 150 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 DUPD1Q68J44 220 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 TRIM68Q6AZZ1 485 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 IL31Q6EBC2 164 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 OR7D4Q8NG98 312 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 CCHCR1Q8TD31 782 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 IFT81Q8WYA0 676 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 RTP4Q96DX8 246 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 MUC3BQ9H195 1237 aa21.87■■□□□ 1.09
R3HCC1-208ENST00000522012 RNF103O00237 685 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 MTSS1O43312 755 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 ZNF189O75820 626 aaPredicted RBP21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 RPL22P35268 128 aaKnown RBP21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 ZNF33AQ06730 810 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 GPS1Q13098 491 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 SERINC3Q13530 473 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 TRADDQ15628 312 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 TIGD7Q6NT04 549 aaPredicted RBP21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 RHBDF2Q6PJF5 856 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 PARM1Q6UWI2 310 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 VITQ6UXI7 678 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 OTOP3Q7RTS5 596 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 CCDC110Q8TBZ0 833 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 CASKIN2Q8WXE0 1202 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 ZFYVE19Q96K21 471 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 KXD1Q9BQD3 176 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 CEP41Q9BYV8 373 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 SP110Q9HB58 689 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 GDF3Q9NR23 364 aa21.86■■□□□ 1.09
R3HCC1-208ENST00000522012 C5orf60A6NFR6 353 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 J3KR12 359 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 PENKP01210 267 aaPredicted RBP21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 CLCN6P51797 869 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 DHCR24Q15392 516 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 P3H1Q32P28 736 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 EML3Q32P44 896 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 ZNF783Q6ZMS7 281 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 YAF2Q8IY57 180 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 TAB3Q8N5C8 712 aaPredicted RBP21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 WFDC5Q8TCV5 224 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 ASIC4Q96FT7 647 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 PLA2G2FQ9BZM2 168 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 CLEC4EQ9ULY5 219 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 MATN3O15232 486 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 GCATO75600 419 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 TYRP14679 529 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 ARSAP15289 507 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 ETFBP38117 255 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 RPL21P46778 160 aaKnown RBP21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 WASHC5Q12768 1159 aa21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 SMAD4Q13485 552 aaKnown RBP21.85■■□□□ 1.09
R3HCC1-208ENST00000522012 GRM2Q14416 872 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms