RNA–Protein interactions for RNA: ENST00000521767.1

UBR5-211, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-211	ENST00000521767	SCAMP3	O14828	347 aa	Known RBP	13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	MATN3	O15232	486 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	CHAD	O15335	359 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	RAMP2	O60895	175 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	CLDN11	O75508	207 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	JCHAIN	P01591	159 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	FDFT1	P37268	417 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	MAGEA6	P43360	314 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	PMS2	P54278	862 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	KCNJ11	Q14654	390 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	POLD3	Q15054	466 aa	Predicted RBP	13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	PARP6	Q2NL67	630 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	PARP15	Q460N3	678 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	TEX44	Q53QW1	395 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	TIGD7	Q6NT04	549 aa	Predicted RBP	13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	CHST9	Q7L1S5	443 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	FAM217A	Q8IXS0	508 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	SH3RF2	Q8TEC5	729 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	HMCES	Q96FZ2	354 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	VAT1	Q99536	393 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	SMG9	Q9H0W8	520 aa	Known RBP	13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	SFXN1	Q9H9B4	322 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	IPO11	Q9UI26	975 aa	Known RBP	13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	ZMYM5	Q9UJ78	669 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	TRHDE	Q9UKU6	1024 aa		13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	MRPS23	Q9Y3D9	190 aa	Known RBP	13.72	□□□□□ -0.21
UBR5-211	ENST00000521767	GOLGA8M	H3BSY2	632 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	GFRA2	O00451	464 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	APRT	P07741	180 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	CCNB1	P14635	433 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	HSD17B3	P37058	310 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	SGSH	P51688	502 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	UAP1	Q16222	522 aa	Predicted RBP	13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	SPDYC	Q5MJ68	293 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	FAXC	Q5TGI0	409 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	CEP128	Q6ZU80	1094 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	MTERF4	Q7Z6M4	381 aa	Known RBP	13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	TMA16	Q96EY4	203 aa	Known RBP	13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	TDP1	Q9NUW8	608 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	DZANK1	Q9NVP4	752 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	CCL26	Q9Y258	94 aa		13.71	□□□□□ -0.21
UBR5-211	ENST00000521767	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767		A0A1B0GVM2	712 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	E2F8	A0AVK6	867 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	TCAF2	A6NFQ2	919 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	ZBTB24	O43167	697 aa	Predicted RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	TMEM63A	O94886	807 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	CEBPB	P17676	345 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	IFI35	P80217	286 aa	Predicted RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	GAD2	Q05329	585 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	ZBTB17	Q13105	803 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	ZNF177	Q13360	481 aa	Predicted RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	SERINC3	Q13530	473 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	SEMA5A	Q13591	1074 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	CFAP58	Q5T655	872 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	ALS2CL	Q60I27	953 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	BBS7	Q8IWZ6	715 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	IQCK	Q8N0W5	287 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	CPXM2	Q8N436	756 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	ITFG1	Q8TB96	612 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	USP13	Q92995	863 aa	Predicted RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	FATE1	Q969F0	183 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	EXOC4	Q96A65	974 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	TEKT5	Q96M29	485 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	ZSWIM3	Q96MP5	696 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	AGAP3	Q96P47	875 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	IL12RB2	Q99665	862 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	MAGEH1	Q9H213	219 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	PRO3102	Q9H379	93 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	SEMA4A	Q9H3S1	761 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	NSUN3	Q9H649	340 aa	Known RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	DNAJC17	Q9NVM6	304 aa	Known RBP	13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	IGSF9	Q9P2J2	1179 aa		13.71	□□□□□ -0.22
UBR5-211	ENST00000521767	MYOF	Q9NZM1	2061 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767		J3KR12	359 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	TBL1X	O60907	577 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	ACVRL1	P37023	503 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	ARL4C	P56559	192 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	HYAL1	Q12794	435 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	CBX2	Q14781	532 aa	Predicted RBP	13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	HIF1A	Q16665	826 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	ANO4	Q32M45	955 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	SYCP2L	Q5T4T6	812 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	C6orf118	Q5T5N4	469 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	CHRDL2	Q6WN34	429 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	TMEM184A	Q6ZMB5	413 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	SETD3	Q86TU7	594 aa	Predicted RBP	13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	RELL1	Q8IUW5	271 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	HJURP	Q8NCD3	748 aa	Predicted RBP	13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	ING5	Q8WYH8	240 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	MAML1	Q92585	1016 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	ARHGEF2	Q92974	986 aa	Known RBP	13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	PABPC3	Q9H361	631 aa	Known RBP	13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	TBC1D30	Q9Y2I9	924 aa		13.7	□□□□□ -0.22
UBR5-211	ENST00000521767	C5orf42	Q9H799	3197 aa		13.69	□□□□□ -0.22

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