RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 DCLK1O15075 740 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 PAGE1O75459 146 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 DNTTP04053 509 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 KRT3P12035 628 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 CD70P32970 193 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 ETFBP38117 255 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 CSKP41240 450 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 PTPN9P43378 593 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 KLK7P49862 253 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 KRT83P78385 493 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 NRG1Q02297 640 aaPredicted RBP10.5□□□□□ -0.73
TRIM35-204ENST00000521283 ZNF33AQ06730 810 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 CCDC15Q0P6D6 951 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 IQCB1Q15051 598 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 DUOXA1Q1HG43 343 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 RSPO4Q2I0M5 234 aaPredicted RBP10.5□□□□□ -0.73
TRIM35-204ENST00000521283 CLEC16AQ2KHT3 1053 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 HNRNPA1L2Q32P51 320 aaKnown RBP10.5□□□□□ -0.73
TRIM35-204ENST00000521283 PLEKHG6Q3KR16 790 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 PITRM1Q5JRX3 1037 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 IL31Q6EBC2 164 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 KIAA1211LQ6NV74 962 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 FBXL22Q6P050 247 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 KIAA1324Q6UXG2 1013 aaKnown RBP10.5□□□□□ -0.73
TRIM35-204ENST00000521283 USP30Q70CQ3 517 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 DGLUCYQ7Z3D6 616 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 BNIPLQ7Z465 357 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 DSG4Q86SJ6 1040 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 C3orf20Q8ND61 904 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 P2RY11Q96G91 374 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 C2orf49Q9BVC5 232 aaPredicted RBP10.5□□□□□ -0.73
TRIM35-204ENST00000521283 SELENOOQ9BVL4 669 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 ZDHHC4Q9NPG8 344 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 PIGVQ9NUD9 493 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 AIPL1Q9NZN9 384 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 SLC25A13Q9UJS0 675 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 NCKAP1Q9Y2A7 1128 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 TBC1D30Q9Y2I9 924 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 HS3ST4Q9Y661 456 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 ITIH6Q6UXX5 1313 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 DOCK4Q8N1I0 1966 aa10.5□□□□□ -0.73
TRIM35-204ENST00000521283 TNRC6BQ9UPQ9 1833 aaKnown RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SYNJ2BP-COX16A0A087WUM0 186 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SYCE3A1L190 88 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SIGLEC16A6NMB1 481 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 DRGXA6NNA5 263 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 GOLGA8SH3BPF8 625 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 EPHB6O15197 1021 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SYPP08247 313 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 GZMAP12544 262 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 ATP1A3P13637 1013 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 PDGFRAP16234 1089 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 CHRNB2P17787 502 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 TNFAIP3P21580 790 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 PRKCIP41743 596 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SGSHP51688 502 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 COPAP53621 1224 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SLC20A2Q08357 652 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 ELAVL3Q14576 367 aaKnown RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 NR1I3Q14994 352 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SFMBT2Q5VUG0 894 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 DAB2IPQ5VWQ8 1189 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 ZNF776Q68DI1 518 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 ACAD10Q6JQN1 1059 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 MRPL14Q6P1L8 145 aaKnown RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SLC23A3Q6PIS1 610 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 MMS22LQ6ZRQ5 1243 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 VPS36Q86VN1 386 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 CFAP52Q8N1V2 620 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 RLN3Q8WXF3 142 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 CENPIQ92674 756 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SYN2Q92777 582 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 RMDN1Q96DB5 314 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 TRIM44Q96DX7 344 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 TRIM11Q96F44 468 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 ZDHHC5Q9C0B5 715 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 MKRN2Q9H000 416 aaKnown RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 OSBPL2Q9H1P3 480 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SGK2Q9HBY8 427 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 SEPT11Q9NVA2 429 aaKnown RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 WSB2Q9NYS7 404 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 COX16Q9P0S2 106 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 PPARGC1AQ9UBK2 798 aaKnown RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 MBD1Q9UIS9 605 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-204ENST00000521283 PILRBQ9UKJ0 227 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 VANGL2Q9ULK5 521 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 CYP8B1Q9UNU6 501 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 ERVW-1Q9UQF0 538 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 RAD54BQ9Y620 910 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 GON4LQ3T8J9 2241 aa10.49□□□□□ -0.73
TRIM35-204ENST00000521283 CACNA1AO00555 2505 aa10.48□□□□□ -0.73
TRIM35-204ENST00000521283 MUC22E2RYF6 1773 aaPredicted RBP10.48□□□□□ -0.73
TRIM35-204ENST00000521283 IGLV3-10A0A075B6K4 115 aa10.48□□□□□ -0.73
TRIM35-204ENST00000521283 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.48□□□□□ -0.73
TRIM35-204ENST00000521283 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.48□□□□□ -0.73
TRIM35-204ENST00000521283 A0A1W2PQJ5 194 aa10.48□□□□□ -0.73
TRIM35-204ENST00000521283 ANTXRLA6NF34 631 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms