RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 DNMBPQ6XZF7 1577 aa3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 ARHGEF17Q96PE2 2063 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P41-201ENST00000520234 WDR97A6NE52 1622 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 FYCO1Q9BQS8 1478 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 TOPBP1Q92547 1522 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 DPPA5A6NC42 116 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 TMEM247A6NEH6 219 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 EIF3FO00303 357 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 TLR2O60603 784 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 TSPAN3O60637 253 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 METTL18O95568 372 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 CNPP09543 421 aaKnown RBP3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ACP5P13686 325 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 MMP13P45452 471 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ABCG1P45844 678 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZNF91Q05481 1191 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 GOLGA8FQ08AF8 430 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZNF484Q5JVG2 852 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 CBWD5Q5RIA9 395 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZNF626Q68DY1 528 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 DENND1BQ6P3S1 775 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 KIAA1324Q6UXG2 1013 aaKnown RBP3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 SYNE3Q6ZMZ3 975 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 GALNT7Q86SF2 657 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ANKRD13BQ86YJ7 626 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 KLBQ86Z14 1044 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ADGRF4Q8IZF3 695 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ANKRD44Q8N8A2 993 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 CEP70Q8NHQ1 597 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 WASF1Q92558 559 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 COQ8BQ96D53 544 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ADAD1Q96M93 576 aaKnown RBP3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 COG8Q96MW5 612 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 TMEM79Q9BSE2 394 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 PIMREGQ9BSJ6 248 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 TRIM31Q9BZY9 425 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 CLPBQ9H078 707 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 RIC8AQ9NPQ8 531 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 TUBA8Q9NY65 449 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 AGO2Q9UKV8 859 aaKnown RBP3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 DNAJC16Q9Y2G8 782 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZMYM2Q9UBW7 1377 aa3.62□□□□□ -1.83
HMGB1P41-201ENST00000520234 POLA1P09884 1462 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 KIR2DS5A0A0G2JLQ3 304 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 NPIPB13A6NJU9 1138 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 NPIPB5A8MRT5 1133 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 NPIPB4C9JG80 1138 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 STX16-NPEPL1H3BU86 382 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 KIR2DS3K7RE56 304 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 STX16O14662 325 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 MSI1O43347 362 aaKnown RBP3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 NFATC1O95644 943 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 CYP4B1P13584 511 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 GSTM2P28161 218 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 CHRNA5P30532 468 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 GALNT3Q14435 633 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SEMA3AQ14563 771 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 PGM5Q15124 567 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 DLGAP5Q15398 846 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 PLK5Q496M5 336 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 GXYLT1Q4G148 440 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 LRRC24Q50LG9 513 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 HSP90AB4PQ58FF6 505 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 RUNDC3AQ59EK9 446 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 KIAA1755Q5JYT7 1200 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 TTC39AQ5SRH9 613 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 PXDC1Q5TGL8 231 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 MTFR2Q6P444 385 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC30A9Q6PML9 568 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC2A7Q6PXP3 512 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZNF793Q6ZN11 406 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 CYB5R4Q7L1T6 521 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SCN4BQ8IWT1 228 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC44A5Q8NCS7 719 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 C16orf52Q8NHV5 167 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 FAM110DQ8TAY7 271 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 DENND1AQ8TEH3 1009 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SCARB1Q8WTV0 552 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 KCNJ9Q92806 393 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 USP13Q92995 863 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 RPL36ALQ969Q0 106 aaKnown RBP3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SH3KBP1Q96B97 665 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 UBXN10Q96LJ8 280 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 TWNKQ96RR1 684 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SCNM1Q9BWG6 230 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 ARHGAP39Q9C0H5 1083 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 THAP1Q9NVV9 213 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 KLQ9UEF7 1012 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 SUFUQ9UMX1 484 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 CC2D2AQ9P2K1 1620 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 PDS5BQ9NTI5 1447 aa3.61□□□□□ -1.83
HMGB1P41-201ENST00000520234 KDM5BQ9UGL1 1544 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 SETD1BQ9UPS6 1966 aaKnown RBP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 CUL7Q14999 1698 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 DNAJC9-AS1A6NH13 148 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 SYN3O14994 580 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 TLX3O43711 291 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms