RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 KIF1BPQ96EK5 621 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 ABHD14AQ9BUJ0 271 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 ITPAQ9BY32 194 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 TTYH1Q9H313 450 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 BRF2Q9HAW0 419 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 TXNRD2Q9NNW7 524 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 SMYD2Q9NRG4 433 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 VPS28Q9UK41 221 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 MAFFQ9ULX9 164 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 DTX4Q9Y2E6 619 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 PSAT1Q9Y617 370 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 PIAS3Q9Y6X2 628 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 COL4A3Q01955 1670 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 GRID2IPA4D2P6 1211 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 EXOC3O60645 756 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 SEC14L2O76054 403 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 HLA-DQA2P01906 255 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 RGS2P41220 211 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 SOX10P56693 466 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 RPS3AP61247 264 aaKnown RBP5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 RPL7AP62424 266 aaKnown RBP5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 HOXA4Q00056 320 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 FOXI1Q12951 378 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 CUL4AQ13619 759 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 IL13RA2Q14627 380 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 SLC18A3Q16572 532 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 KLHL24Q6TFL4 600 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 NAPRTQ6XQN6 538 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 MDGA2Q7Z553 956 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 RFX6Q8HWS3 928 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 CCDC17Q96LX7 622 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 SYNCQ9H7C4 482 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 EIF2B3Q9NR50 452 aaKnown RBP5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 HAUS2Q9NVX0 235 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 TMEM248Q9NWD8 314 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 HDAC6Q9UBN7 1215 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 ST3GAL5Q9UNP4 418 aa5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 HEMK1Q9Y5R4 338 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P46-201ENST00000520062 LOC100996750A0A140TA64 210 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 C17orf113A0A1B0GUU1 675 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 TCRBV5S1A1TA0A578 114 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 C16orf96A6NNT2 1141 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 C17orf100A8MU93 164 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 GCATO75600 419 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 EFNB1P98172 346 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 SLC14A1Q13336 389 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 DCTN2Q13561 401 aaKnown RBP5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 AP5B1Q2VPB7 878 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 VWA5B1Q5TIE3 1220 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 NAPEPLDQ6IQ20 393 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 ZNF474Q6S9Z5 364 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 OR8H2Q8N162 312 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 OR52N4Q8NGI2 321 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 KCNG4Q8TDN1 519 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 USP6NLQ92738 828 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 CELF1Q92879 486 aaKnown RBP5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 MPHOSPH8Q99549 860 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 MACROD1Q9BQ69 325 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 GATA5Q9BWX5 397 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 CADM1Q9BY67 442 aaKnown RBP5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 NUAK2Q9H093 628 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 UPB1Q9UBR1 384 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 TBC1D29Q9UFV1 150 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 LYVE1Q9Y5Y7 322 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 EMSYQ7Z589 1322 aa5.73□□□□□ -1.49
HMGB1P46-201ENST00000520062 KCNJ18B7U540 433 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 TCERG1O14776 1098 aaKnown RBP5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 JTBO76095 146 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 ZNF202O95125 648 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 TYK2P29597 1187 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 MAPK4P31152 587 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 ANXA2RQ3ZCQ2 193 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 TMEM81Q6P7N7 255 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 SLC30A9Q6PML9 568 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 C17orf99Q6UX52 265 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 GALNT5Q7Z7M9 940 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 NEK8Q86SG6 692 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 RASAL3Q86YV0 1011 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 PAQR4Q8N4S7 273 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 C11orf65Q8NCR3 313 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 SETD9Q8NE22 299 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 FAM110DQ8TAY7 271 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 KLHL29Q96CT2 875 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 TIMP4Q99727 224 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 PRKRIP1Q9H875 184 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 MMRN2Q9H8L6 949 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 ARL15Q9NXU5 204 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 NKIRAS2Q9NYR9 191 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 IL1RAPL1Q9NZN1 696 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 CLDN16Q9Y5I7 305 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 RSF1Q96T23 1441 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
HMGB1P46-201ENST00000520062 TEX13CA0A0J9YWL9 993 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 AP3D1O14617 1153 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 TGFB1I1O43294 461 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 STRNO43815 780 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF500O60304 480 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 CHRM5P08912 532 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms