RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 GOLGA7BQ2TAP0 167 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 DUSP28Q4G0W2 176 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ZFYVE27Q5T4F4 411 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 HHATQ5VTY9 493 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 FYB2Q5VWT5 728 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 OR6B2Q6IFH4 312 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PMF1Q6P1K2 205 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 DARS2Q6PI48 645 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 EP400NLQ6ZTU2 488 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ZNF534Q76KX8 674 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 EEPD1Q7L9B9 569 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 TBC1D1Q86TI0 1168 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 CAND1Q86VP6 1230 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 WFDC3Q8IUB2 231 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 IGDCC3Q8IVU1 814 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PALM2Q8IXS6 379 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 KLHDC8BQ8IXV7 354 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 HACE1Q8IYU2 909 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 C4orf33Q8N1A6 199 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ZNF513Q8N8E2 541 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 ENDOVQ8N8Q3 282 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 MAB21L3Q8N8X9 362 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 FAM71DQ8N9W8 422 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ANKRD52Q8NB46 1076 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 GPRC5AQ8NFJ5 357 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 BEST2Q8NFU1 509 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 NLGN2Q8NFZ4 835 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 NETO1Q8TDF5 533 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 TCP10LQ8TDR4 215 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ACMSDQ8TDX5 336 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 NT5C3BQ969T7 300 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SKA1Q96BD8 255 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ACSF2Q96CM8 615 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 OPTNQ96CV9 577 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 CLMNQ96JQ2 1002 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 HEXIM2Q96MH2 286 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 C7orf26Q96N11 449 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 OLFM3Q96PB7 478 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 FANCD2OSQ96PS1 177 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 QKIQ96PU8 341 aaKnown RBP eCLIP5.21□□□□□ -1.58
SDC2-204ENST00000519914 LRRC37BQ96QE4 947 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SIKE1Q9BRV8 207 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SNRNP25Q9BV90 132 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 KLC2Q9H0B6 622 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SYNCQ9H7C4 482 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 NRDE2Q9H7Z3 1164 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 KIF9Q9HAQ2 790 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 RC3H2Q9HBD1 1191 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 XAB2Q9HCS7 855 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 MLXIPLQ9NP71 852 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SLCO1B3Q9NPD5 702 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PDGFCQ9NRA1 345 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.21□□□□□ -1.58
SDC2-204ENST00000519914 ETNK2Q9NVF9 386 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 MTMR10Q9NXD2 777 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 CRIM1Q9NZV1 1036 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SIRPGQ9P1W8 387 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SAE1Q9UBE0 346 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 HESX1Q9UBX0 185 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ITGB1BP2Q9UKP3 347 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 UBQLN1Q9UMX0 589 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 MTO1Q9Y2Z2 717 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 NME7Q9Y5B8 376 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 RAD54BQ9Y620 910 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 U3KQE9 123 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 TRIP12Q14669 1992 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 ZNF638Q14966 1978 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 PATJQ8NI35 1801 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 TMEM238LA0A1B0GVL6 79 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 SLC15A5A6NIM6 579 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 KBTBD13C9JR72 458 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 HAS3O00219 553 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 LIN7AO14910 233 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 BIRC5O15392 142 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 NDUFB5O43674 189 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 ATP2C2O75185 946 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 SNNO75324 88 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 BANF1O75531 89 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 DAB1O75553 588 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 RFPL1O75677 317 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 KRT37O76014 449 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 DDNO94850 711 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 SNUPNO95149 360 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 SNAI1O95863 264 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 CD4P01730 458 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 APOEP02649 317 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 MT-ND3P03897 115 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 MMP3P08254 477 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 INHBAP08476 426 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 SNRPAP09012 282 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 TROVE2P10155 538 aaKnown RBP eCLIP5.2□□□□□ -1.58
SDC2-204ENST00000519914 GNAZP19086 355 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 WARSP23381 471 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 ADRA1DP25100 572 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 RBL1P28749 1068 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 LRPAP1P30533 357 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 HOXC8P31273 242 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 SDC4P31431 198 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PNPLA4P41247 253 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 GLUD2P49448 558 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms