RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 KNTC1P50748 2209 aa12.81□□□□□ -0.36
CSMD1-205ENST00000519623 NYNRINQ9P2P1 1898 aaKnown RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 A0A1W2PR77 199 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 M0QYT0 321 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ATP9BO43861 1147 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ADCY5O95622 1261 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ADH1BP00325 375 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 IL1BP01584 269 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 TFE3P19532 575 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 CDH5P33151 784 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 DRD3P35462 400 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 GGCXP38435 758 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 GABRB2P47870 512 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 CXCR3P49682 368 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 METAP1P53582 386 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ELAVL3Q14576 367 aaKnown RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 DRAP1Q14919 205 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 HSP90AA4PQ58FG1 418 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 PRAMEF14Q5SWL7 426 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ARTNQ5T4W7 220 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ZDHHC17Q8IUH5 632 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 FAM114A1Q8IWE2 563 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 OR14C36Q8NHC7 312 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 FAM131CQ96AQ9 280 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 SLC6A18Q96N87 628 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 NAA15Q9BXJ9 866 aaKnown RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 SIK2Q9H0K1 926 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 ARHGEF38Q9NXL2 777 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 RRN3Q9NYV6 651 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 SARDHQ9UL12 918 aa12.8□□□□□ -0.36
CSMD1-205ENST00000519623 DSPP15924 2871 aaKnown RBP12.8□□□□□ -0.36
CSMD1-205ENST00000519623 A0A1B0GTQ1 180 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 PLK4O00444 970 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 LATO43561 262 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 DFNA5O60443 496 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 CLDN11O75508 207 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 CNTN5O94779 1100 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 PRKCSHP14314 528 aaPredicted RBP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 CYP11B1P15538 503 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 CCT8P50990 548 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 ADPRHP54922 357 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 CDH4P55283 916 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 C21orf59P57076 290 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 SCAPQ12770 1279 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 SHBQ15464 509 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 DLG2Q15700 870 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 TMPRSS7Q7RTY8 843 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 ADAT2Q7Z6V5 191 aaKnown RBP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 ZNF683Q8IZ20 524 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 TMEM35BQ8NCS4 154 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 C18orf8Q96DM3 657 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 PGAP3Q96FM1 320 aaPredicted RBP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 SPAG5Q96R06 1193 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 ACE2Q9BYF1 805 aaPredicted RBP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 WDCPQ9H6R7 721 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 SAMSN1Q9NSI8 373 aaKnown RBP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 PPM1HQ9ULR3 514 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
CSMD1-205ENST00000519623 TP53BP1Q12888 1972 aaPredicted RBP12.79□□□□□ -0.36
CSMD1-205ENST00000519623 ARID1BQ8NFD5 2236 aaPredicted RBP12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3DA0A087WVF3 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3IA0A087WXS9 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3EA0A087X179 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3KA0A087X1G2 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3FA6NER0 549 aaPredicted RBP12.78□□□□□ -0.36
CSMD1-205ENST00000519623 DRGXA6NNA5 263 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3LB9A6J9 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 MCF2LO15068 1137 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TNFSF14O43557 240 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 MT-CO1P00395 513 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3HP0C7X1 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 CD38P28907 300 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 SCNN1AP37088 669 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 GRK6P43250 576 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 PPP2CBP62714 309 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 PPP2CAP67775 309 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 IL9RQ01113 521 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 RAPGEF1Q13905 1077 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 ACCSLQ4AC99 568 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 ALFQ53S48 1182 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 BRMS1LQ5PSV4 323 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3GQ6DHY5 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3CQ6IPX1 549 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 ERICH1Q86X53 443 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 XYLT1Q86Y38 959 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TBC1D3Q8IZP1 549 aaPredicted RBP12.78□□□□□ -0.36
CSMD1-205ENST00000519623 SH2D3CQ8N5H7 860 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 OR8D1Q8WZ84 308 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 C1orf74Q96LT6 269 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 PSMB7Q99436 277 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 ELF4Q99607 663 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms